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Hypocotyl/Stem
  |----- Hypocotyl length ( short hypocotyls )

Found 95 mutant, 89 genes

cytokinin

Mutant Ecotype Mutagenesis type Mutated Gene
1. 35S::AHP2 Col-0 Transgenic plant AT3G29350
2. pga22 Ws T-DNA insertion_activation tag AT3G19160
3. tsd1 Col-0 EMS AT5G49720

ethylene

Mutant Ecotype Mutagenesis type Mutated Gene
4. AtTRP1F-GFP Col-0 AT4G30480
5. EIL1ox Col-0 Transgenic plant AT2G27050
6. EIN3ox Col-0 Transgenic plant AT3G20770
7. ERF1ox Col-0 Transgenic plant AT3G23240
8. amiR-ETP1/ETP2 Col-0 artifical RNAi AT3G18980 AT3G18910
9. ctr1 mkk9 Col-0 AT5G03730 AT1G73500
10. ctr1 wei2 Col-0 AT5G03730
11. ctr1 wei7 Col-0 AT5G03730
12. ctr1-1 Col-0 DEB(diepoxybutane mutagenesis) AT5G03730
13. ctr1-1 ebf1-3 AT2G25490 AT5G03730
14. ctr1-1 ein4-1 Col-0 AT5G03730 AT3G04580
15. ctr1-1 ers1 Col-0 AT5G03730 AT2G40940
16. ctr1-1 hls1-1 Col-0 AT4G37580 AT5G03730
17. ctr1-3 Col-0 EMS AT5G03730
18. ctr1-4 Col-0 EMS AT5G03730
19. cul3hyp Col-0 cross of cul3a-3 and cul3b-1 AT1G26830 AT1G69670
20. ebf1-2 Col-0 T-DNA insertion_knock out AT2G25490
21. ebf1-3 ebf2-3 AT2G25490 AT5G25350
22. ebf2-1 Col-0 T-DNA insertion_knock out AT5G25350
23. ebf2-2 Col-0 T-DNA insertion_knock out AT5G25350
24. ebf2-3 Col-0 T-DNA insertion_knock out AT5G25350
25. eer1 Ws T-DNA insertion_knock out AT1G25490
26. eer1 ctr1-3 mixed AT1G25490 AT5G03730
27. eer2 Col-0 EER2
28. eer4 Ws EMS AT1G17440
29. eer4 ctr1 mixed AT1G17440 AT5G03730
30. ein2-1 ebf1-1 ebf2-1 Col-0 AT2G25490 AT5G03280 AT5G25350
31. ein5-1 ctr1-1 Col-0 AT1G54490 AT5G03730
32. ein5-1 ebf2-1 AT1G54490 AT5G25350
33. ers1 etr1 AT1G66340 AT2G40940
34. eto1-1 Col-0 EMS AT3G51770
35. eto2 Ler AT5G65800
36. eto3 AT3G49700
37. etr1-3 ctr1-1 Col-0 AT1G66340 AT5G03730
38. etr1-6 etr2-3 ein4-4 AT1G66340 AT3G04580 AT3G23150
39. etr1-6 etr2-3 ein4-4 ers2-3 AT1G04310 AT1G66340 AT3G04580 AT3G23150
40. etr1-7 ein4-1 AT1G66340 AT3G04580
41. ran1-3 EMS AT5G44790
42. rte1 AT2G26070

auxin

Mutant Ecotype Mutagenesis type Mutated Gene
43. ARF8-D Ler other AT5G37020
44. arf5/mp Col-0 EMS AT1G19850
45. arf6arf8 Col-0 T-DNA insertion_knock out AT1G30330 AT5G37020
46. axr2-1 Col-0 EMS AT3G23050
47. axr3-1 Col-0 EMS AT1G04250
48. axr6 Col-0 DEB AT4G02570
49. cul1-6 Col-0 EMS AT4G02570
50. dfl1-D Col-0 T-DNA insertion_activation tag AT5G54510
51. dsrub Col-0 AT1G31340
52. ebf1 cul1 Col-1 AT4G02570
53. ebf2 cul1 Col-2 AT4G02570
54. ecr1-1 Col-0 EMS AT5G19180
55. enhancer of tir1-1 auxin resistance (eta2-1) Col-0 EMS AT2G02560
56. mARF17-D Col-0 other AT1G77850
57. pin1 pid AT1G73590 AT2G34650
58. pin2pin3pin4pin7 AT1G23080 AT1G70940 AT2G01420 AT5G57090
59. pin7 AT1G23080
60. shy2-2 Ler EMS AT1G04240
61. slr-1 Col-0 EMS AT4G14550
62. sur1 Col-0 EMS AT2G20610
63. sur2 Ws T-DNA insertion_knock out AT4G31500
64. tir1 afb1 afb2 afb3 AT3G26810 AT3G62980
65. ydk1-D Col-0 T-DNA insertion_activation tag AT4G37390

abscisic acid

Mutant Ecotype Mutagenesis type Mutated Gene
66. ein3-1abi8 cross AT3G08550 AT3G20770
67. hyl1 Nossen Ds insertion AT1G09700
68. rcn1 Ws T-DNA insertion_activation tag AT1G25490
69. sax1 Col-0 other SAX1
70. shw1 Col-0 T-DNA insertion_knock out AT1G69935

gibberellin

Mutant Ecotype Mutagenesis type Mutated Gene
71. 35S:gai-GFP Ler Transgenic plant AT1G14920
72. atbh4-1 hat3-1 Col-0 cross AT2G44910
73. ga1-3 Ler fast neutron mutagenesis AT4G02780
74. ga20ox1 ga20ox2 Col-0 AT5G51810 AT4G25420
75. ga20ox2 Col-0 AT5G51810
76. gid1a-1 gid1b-1 gid1c-2 Col-0 T-DNA insertion_activation tag AT3G63010 AT5G27320 AT3G05120

Brassinosteroid

Mutant Ecotype Mutagenesis type Mutated Gene
77. 35S:MSBP1 Col-0 AT5G52240
78. TCP1-SRDX Ws AT1G67260
79. atmyb30 Col-0 T-DNA insertion_knock out AT3G28910
80. exo Col-0 T-DNA insertion_knock out AT4G08950
81. expA5-1 AT3G29030

brassinosteroid

Mutant Ecotype Mutagenesis type Mutated Gene
82. BSU1 RNAi Ws other AT1G03445
83. bak1-1 Ws T-DNA insertion AT4G33430
84. bee1bee2bee3 Col-0 T-DNA insertion_knock out AT1G73830 AT1G18400 AT4G36540
85. bes1 RNAi Col-0 other AT1G19350
86. bim1/2/3 triple mutant Col-0 T-DNA insertion_knock out AT1G69010 AT5G08130 AT5G38860
87. bin2-1 Col-0 other AT4G18710
88. bri1-101 Col-0 other AT4G39400
89. chi2 T-DNA insertion_activation tag AT1G17060
90. cpd Col-0 T-DNA insertion_activation tag AT5G05690
91. det2-1 Col-0 EMS AT2G38050
92. dwf1-1 Ws T-DNA insertion_knock out AT3G19820
93. dwf4-1 Col-0 T-DNA insertion_activation tag AT3G50660
94. smt1 Ws other AT5G13170
95. sob7-D Col-0 T-DNA insertion_activation tag AT1G17060


View protein-protein interactions of all these genes by Arabidopsis Interactions Viewer