You are querying gene by "AT5G65670".

Locus: AT5G65670 Alias: IAA9

Hormone Evidence Function category Gene Description PMID
auxinGeneOntology - auxin mediated signaling pathway 11115889

Basic gene information ( show / hide contents )

Locus AT5G65670 | Chromosome: 5 | Strand: +
Description auxin mediated signaling pathway
IAA9( alias )
Gene model
AT5G65670.1 | From: 26270884 | To: 26273694
AT5G65670.2 | From: 26270884 | To: 26273607
AT5G65670.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT5G65670.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
transcription factor activity PMID: 11118137
nucleus PMID: 7658471
response to auxin stimulus PMID: 12036262
auxin mediated signaling pathway PMID: 11115889
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT5G65670.1 
length: 1624 
miRNA : ath-miR172b*
length: 20 
mfe: -29.0 kcal/mol 
p-value: 0.000447 
position  1048 
target 5' U              A     U 
miRNA  3'         A      A       
target: AT5G65670.2 
length: 1531 
miRNA : ath-miR172b*
length: 20 
mfe: -29.0 kcal/mol 
p-value: 0.000406 
position  1048 
target 5' U              A     U 
miRNA  3'         A      A       

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_59302
NP_569017Arabidopsis thaliana
NP_851275 ( AT5G65670 )Arabidopsis thaliana
28179.m000461Ricinus communis
30170.m013613Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF023099.8e-8762326IPR003311AUX/IAA protein
PfamPF023091.0E-8462328IPR003311AUX/IAA protein