You are querying gene by "AT5G65670".

Locus: AT5G65670 Alias: IAA9

Hormone Evidence Function category Gene Description PMID
auxinGeneOntology - auxin mediated signaling pathway 11115889

Basic gene information ( show / hide contents )

Locus AT5G65670 | Chromosome: 5 | Strand: +
Description auxin mediated signaling pathway
Alias
IAA9( alias )
Gene model
AT5G65670.1 | From: 26270884 | To: 26273694
AT5G65670.2 | From: 26270884 | To: 26273607
Sequence
AT5G65670.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT5G65670.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
transcription factor activity PMID: 11118137
cellular_component
nucleus PMID: 7658471
biological_process
response to auxin stimulus PMID: 12036262
auxin mediated signaling pathway PMID: 11115889
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT5G65670.1 
length: 1624 
miRNA : ath-miR172b*
length: 20 
 
mfe: -29.0 kcal/mol 
p-value: 0.000447 
 
position  1048 
target 5' U              A     U 
           GUGGAUC UAAUGG GCUGC  
           CACUUAG AUUACC CGACG  
miRNA  3'         A      A       
 
 
target: AT5G65670.2 
length: 1531 
miRNA : ath-miR172b*
length: 20 
 
mfe: -29.0 kcal/mol 
p-value: 0.000406 
 
position  1048 
target 5' U              A     U 
           GUGGAUC UAAUGG GCUGC  
           CACUUAG AUUACC CGACG  
miRNA  3'         A      A       
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_59302
AccessionTaxon
NP_569017Arabidopsis thaliana
NP_851275 ( AT5G65670 )Arabidopsis thaliana
28179.m000461Ricinus communis
30170.m013613Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF023099.8e-8762326IPR003311AUX/IAA protein
PfamPF023091.0E-8462328IPR003311AUX/IAA protein
PROSITEPS5096229.967217319IPR011525Aux/IAA-ARF-dimerisation
PROSITEPS509620.0217319IPR011525Aux/IAA-ARF-dimerisation