You are querying gene by "AT5G64813".

Locus: AT5G64813 Alias: LIP1

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT5G64813 | Chromosome: 5 | Strand: +
Description The LIP1 gene encodes a small GTPase that influences the light input pathway of the plant circadian network. An MBP:LIP1 fusion protein has GTP hydrolyzing abilities in vitro. In plants, LIP1 seems to play a negative role in regulating circadian period that can be suppressed by light. LIP1 also seems to negatively affect light-pulse-dependent resetting of the clock, especially during the first portion of the subjective evening. LIP1 expression levels are not significantly affected by the circadian clock in seedlings grown under LL conditions. The levels of the YFP:LIP1 protein expressed under the control of the 35S promoter, shows a low amplitude variation, with protein levels peaking near the beginning of subjective night under LL conditions. In hypocotyl epidermal cells of dark and light-grown seedlings, a YFP:LIP1 fusion protein can be seen in the cytoplasm and the nucleus, and does not cluster in nuclear speckles. LIP1 may also be involved in photomorphogenesis.
Alias
LIP1( alias )
Gene model
AT5G64813.1 | From: 25927505 | To: 25930122
Sequence
AT5G64813.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
GTPase activity PMID: 17683937
cellular_component
nucleus PMID: 17683937
cytoplasm PMID: 17683937
biological_process
circadian regulation of gene expression PMID: 17683937
photomorphogenesis PMID: 17683937
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

No miRNA interaction information for this gene.

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_15941
AccessionTaxon
NP_568996 ( AT5G64813 )Arabidopsis thaliana
NP_001049522Oryza sativa Japonica Group
NP_001064117Oryza sativa Japonica Group
29346.m000113Ricinus communis
NP_196553Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PROSITEPS514190.012285IPR020851Small GTPase
PRINTSPR004495.5999998941702304E-82344IPR001806Ras GTPase
PfamPF000716.200000000000002E-1524173IPR013753Ras
PROSITEPS006750.02538IPR002078RNA polymerase sigma factor 54, interaction
PRINTSPR004495.5999998941702304E-8151164IPR001806Ras GTPase