You are querying gene by "AT5G63980".

Locus: AT5G63980 Alias: ATSAL1

Hormone Evidence Function category Gene Description PMID
abscisic acidMutant Hormone signal transduction encodes an inositol polyphosphate 1-phosphatase,a second messenger,single nuclear mutation. 11485991
GeneOntology - abscisic acid mediated signaling 11485991

Basic gene information ( show / hide contents )

Locus AT5G63980 | Chromosome: 5 | Strand: +
Description encodes an inositol polyphosphate 1-phosphatase,a second messenger,single nuclear mutation.
Alias
ATSAL1( alias )
FRY1( alias )
HOS2( alias )
SAL1( alias )
Gene model
AT5G63980.1 | From: 25627038 | To: 25629159
Sequence
AT5G63980.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
3'(2'),5'-bisphosphate nucleotidase activity PMID: 8721754
inositol or phosphatidylinositol phosphatase activity PMID:
cellular_component
chloroplast PMID:
biological_process
RNA catabolic process PMID: 17993620
sulfur metabolic process PMID:
abscisic acid mediated signaling PMID: 11485991
response to cold PMID: 10097388
negative regulation of signal transduction PMID: 10097388
response to abiotic stimulus PMID: 11485991
response to cation stress PMID: 8721754
negative regulation of transcription PMID: 10097388
phosphoinositide-mediated signaling PMID: 8721754
KEGG pathway This gene participates in 3 pathways:
Pathway Enzyme
Sulfur metabolism 3'(2'), 5'-bisphosphate nucleotidase
Inositol phosphate metabolism inositol polyphosphate 1-phosphatase
Phosphatidylinositol signaling system inositol polyphosphate 1-phosphatase
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   abscisic acid   ]

Genotype PMID Type
fry1-1 11485991 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT5G63980.1 
length: 1383 
miRNA : ath-miR164a
length: 21 
 
mfe: -30.4 kcal/mol 
p-value: 0.005664 
 
position  1268 
target 5' C      U            G 
           GUACGU CUUUGUUUCUCU  
           CGUGCA GGGACGAAGAGG  
miRNA  3' A      C            U 
 
 
target: AT5G63980.1 
length: 1383 
miRNA : ath-miR164b
length: 21 
 
mfe: -30.4 kcal/mol 
p-value: 0.009334 
 
position  1268 
target 5' C      U            G 
           GUACGU CUUUGUUUCUCU  
           CGUGCA GGGACGAAGAGG  
miRNA  3' A      C            U 
 
 
target: AT5G63980.1 
length: 1383 
miRNA : ath-miR164c
length: 21 
 
mfe: -30.9 kcal/mol 
p-value: 0.007319 
 
position  1267 
target 5' U       U            G 
           CGUACGU CUUUGUUUCUCU  
           GCGUGCA GGGACGAAGAGG  
miRNA  3'         C            U 
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT5G63980IP3negativeotherN/Amutance11485991

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_14260
AccessionTaxon
NP_201203 ( AT5G63980 )Arabidopsis thaliana
146533Chlamydomonas reinhardtii
NP_001066325Oryza sativa Japonica Group
NP_001066326Oryza sativa Japonica Group
estExt_gwp_GeneWisePlus.C_Chr_03.00010297Ostreococcus tauri
e_gw1.83.212.1Physcomitrella patens subsp. patens
28589.m000048Ricinus communis
29917.m001952Ricinus communis
NP_200250Arabidopsis thaliana
NP_001048441Oryza sativa Japonica Group
estExt_fgenesh1_pg.C_470160Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_1580144Physcomitrella patens subsp. patens
fgenesh1_pg.C_Chr_12.0001000131Ostreococcus tauri
DatabaseEntry IDE-valueStartEndInterPro IDDescription
TIGRFAMTIGR013301.1e-25656403IPR0062393(2),5 -bisphosphate nucleotidase HAL2
PfamPF004593.4e-5792398IPR000760Inositol monophosphatase
PRINTSPR003775.4e-0594114IPR000760Inositol monophosphatase
PANTHERPTHR208542.1e-124119407IPR000760Inositol monophosphatase
PROSITEPS00629NA185198IPR020583Inositol monophosphatase, metal-binding site
PRINTSPR003775.4e-05338362IPR000760Inositol monophosphatase