You are querying gene by "AT5G62320".

Locus: AT5G62320 Alias: ATMYB99

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT5G62320 | Chromosome: 5 | Strand: -
Description Encodes a putative transcription factor (MYB99).
Alias
ATMYB99( alias )
ATMYBCU15( alias )
MYB99( alias )
Gene model
AT5G62320.1 | From: 25045942 | To: 25047159
Sequence
AT5G62320.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
transcription factor activity PMID: 11118137
biological_process
regulation of transcription, DNA-dependent PMID: 11597504
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT5G62320.1 
length: 1054 
miRNA : ath-miR838
length: 21 
 
mfe: -21.9 kcal/mol 
p-value: 0.038278 
 
position  193 
target 5' G  C  U   C            U 
           GU CA GGA AGUGGAAGAAGA  
           CA GU UCU UCAUCUUCUUUU  
miRNA  3' A  C                     
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

No related Ortholog Groups information for this gene.

DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR106418.100007343233417E-824135IPR015495Myb transcription factor
PROSITEPS512940.01069IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
Gene3DG3DSA:1.10.10.603.8999986179521834E-101372IPR012287Homeodomain-related
SMARTSM007175.999997028632488E-51471IPR001005SANT, DNA-binding
PfamPF002494.500000000000003E-81569IPR014778Myb, DNA-binding
SuperFamilySSF466895.0E-171592IPR009057Homeodomain-like
PROSITEPS512940.070124IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
SMARTSM007175.599999894170231E-1774122IPR001005SANT, DNA-binding
PfamPF002493.900000000000007E-1275119IPR014778Myb, DNA-binding
Gene3DG3DSA:1.10.10.605.900001049950641E-1676124IPR012287Homeodomain-related
SuperFamilySSF466897.5E-1294154IPR009057Homeodomain-like