You are querying gene by "AT5G61790".

Locus: AT5G61790 Alias: ATCNX1

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT5G61790 | Chromosome: 5 | Strand: -
Description calnexin 1 (CNX1); FUNCTIONS IN: unfolded protein binding, calcium ion binding; INVOLVED IN: protein folding; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Calreticulin/calnexin, P (InterPro:IPR009033), Calreticulin/calnexin (InterPro:IPR001580), Calreticulin/calnexin, conserved site (InterPro:IPR018124), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); BEST Arabidopsis thaliana protein match is: calnexin, putative (TAIR:AT5G07340.1); Has 1344 Blast hits to 1252 proteins in 297 species: Archae - 2; Bacteria - 61; Metazoa - 623; Fungi - 137; Plants - 191; Viruses - 36; Other Eukaryotes - 294 (source: NCBI BLink).
Alias
ATCNX1( alias )
Gene model
AT5G61790.1 | From: 24844328 | To: 24847017
Sequence
AT5G61790.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
calcium ion binding PMID:
unfolded protein binding PMID:
cellular_component
plant-type cell wall PMID: 16287169
microsome PMID: 8454626
endoplasmic reticulum PMID: 16618929
mitochondrion PMID: 14671022
biological_process
protein folding PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT5G61790.1 
length: 2034 
miRNA : ath-miR414
length: 21 
 
mfe: -23.7 kcal/mol 
p-value: 0.019089 
 
position  1010 
target 5' A  U               A  U 
           GA UGG GAUGAUGAGGA GA  
           CU GCU CUACUACUUCU CU  
miRNA  3' A      A           A    
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_12163
AccessionTaxon
NP_196351Arabidopsis thaliana
NP_200987 ( AT5G61790 )Arabidopsis thaliana
108711Chlamydomonas reinhardtii
NP_001052692Oryza sativa Japonica Group
gw1.03.00.381.1Ostreococcus tauri
e_gw1.25.164.1Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_1580023Physcomitrella patens subsp. patens
fgenesh1_pm.scaffold_158000003Physcomitrella patens subsp. patens
30147.m014384Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:2.60.120.2002.3000044072653925E-5620206IPR013320Concanavalin A-like lectin/glucanase, subgroup
SuperFamilySSF498992.1E-5120272IPR008985Concanavalin A-like lectin/glucanase
PfamPF002620.031386IPR001580Calreticulin/calnexin
PANTHERPTHR110730.060527IPR001580Calreticulin/calnexin
PROSITEPS008030.0101116IPR018124Calreticulin/calnexin, conserved site
PRINTSPR006262.1999990098070713E-48103121IPR001580Calreticulin/calnexin
PRINTSPR006262.1999990098070713E-48132148IPR001580Calreticulin/calnexin
PROSITEPS008040.0136144IPR018124Calreticulin/calnexin, conserved site
Gene3DG3DSA:2.10.250.109.400030710307488E-57216361IPR009033Calreticulin/calnexin, P
SuperFamilySSF638872.9E-53216357IPR009033Calreticulin/calnexin, P
PROSITEPS008050.0223235IPR018124Calreticulin/calnexin, conserved site
PRINTSPR006262.1999990098070713E-48230243IPR001580Calreticulin/calnexin
PROSITEPS008050.0240252IPR018124Calreticulin/calnexin, conserved site
PRINTSPR006262.1999990098070713E-48278300IPR001580Calreticulin/calnexin
PROSITEPS008050.0278290IPR018124Calreticulin/calnexin, conserved site
PRINTSPR006262.1999990098070713E-48335354IPR001580Calreticulin/calnexin
SuperFamilySSF498995.7E-7361403IPR008985Concanavalin A-like lectin/glucanase
PRINTSPR006262.1999990098070713E-48367387IPR001580Calreticulin/calnexin