You are querying gene by "AT5G61600".

Locus: AT5G61600 Alias: ERF104

Hormone Evidence Function category Gene Description PMID
ethyleneTransgenic Hormone signal transduction encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. 19416906

Basic gene information ( show / hide contents )

Locus AT5G61600 | Chromosome: 5 | Strand: -
Description encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.
Alias
ERF104( alias )
Gene model
AT5G61600.1 | From: 24783612 | To: 24784656
Sequence
AT5G61600.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
transcription factor activity PMID:
cellular_component
nucleus PMID:
biological_process
regulation of transcription, DNA-dependent PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   ethylene   ]

Genotype PMID Type
ERF104m 19416906 transgenic
ERF104OE 19416906 transgenic

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT5G61600.1 
length: 1045 
miRNA : ath-miR869.1
length: 21 
 
mfe: -23.1 kcal/mol 
p-value: 0.024743 
 
position  647 
target 5' G  G    A            G 
           GA GCUG GGUUGAGCCGGU  
           UU UGGU UUAACUUGGUUA  
miRNA  3' G  G    C              
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_91683
AccessionTaxon
NP_200968 ( AT5G61600 )Arabidopsis thaliana
NP_568755Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:3.30.730.101.1000015067164283E-2486148IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
SuperFamilySSF541713.0E-2486148IPR016177DNA-binding, integrase-type
PfamPF008476.300000000000004E-1387137IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
SMARTSM003802.5000090991618294E-3487151IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PROSITEPS510320.087145IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003673.000000679928713E-138899IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003673.000000679928713E-13127147IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding