You are querying gene by "AT5G60890".

Locus: AT5G60890 Alias: ATMYB34

Hormone Evidence Function category Gene Description PMID
salicylic acidGeneOntology - response to salicylic acid stimulus 16463103
abscisic acidGeneOntology - response to abscisic acid stimulus 16463103
gibberellinGeneOntology - response to gibberellin stimulus 16463103
jasmonic acidGeneOntology - response to jasmonic acid stimulus 16463103

Basic gene information ( show / hide contents )

Locus AT5G60890 | Chromosome: 5 | Strand: +
Description response to jasmonic acid stimulus
Alias
ATMYB34( alias )
ATR1( alias )
MYB34( alias )
Gene model
AT5G60890.1 | From: 24511917 | To: 24513577
Sequence
AT5G60890.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
kinase activity PMID: 8220453
transcription factor activity PMID: 11118137
transcription activator activity PMID: 9576939
biological_process
response to jasmonic acid stimulus PMID: 16463103
response to gibberellin stimulus PMID: 16463103
tryptophan biosynthetic process PMID: 9576939
indole glucosinolate biosynthetic process PMID: 15579661
cellular response to sulfur starvation PMID: 17420480
response to abscisic acid stimulus PMID: 16463103
response to salicylic acid stimulus PMID: 16463103
response to salt stress PMID: 16463103
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT5G60890.1 
length: 1357 
miRNA : ath-miR847
length: 21 
 
mfe: -28.3 kcal/mol 
p-value: 0.010112 
 
position  317 
target 5' A              C  A  G 
           AUCAAGAAGAAGAG AG GA  
           UAGUUCUUCUUCUC UC CU  
miRNA  3' G              C  A    
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_40750
AccessionTaxon
NP_173292Arabidopsis thaliana
NP_177548Arabidopsis thaliana
NP_196386Arabidopsis thaliana
NP_200897 ( AT5G60890 )Arabidopsis thaliana
NP_200950Arabidopsis thaliana
NP_196387Arabidopsis thaliana
NP_851241Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR106415.200000890032763E-933289IPR015495Myb transcription factor
SuperFamilySSF466899.3E-18772IPR009057Homeodomain-like
PROSITEPS512940.0961IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
Gene3DG3DSA:1.10.10.603.7000025104678826E-151264IPR012287Homeodomain-related
SMARTSM007171.0E-131363IPR001005SANT, DNA-binding
PfamPF002491.9E-121461IPR014778Myb, DNA-binding
PROSITEPS512940.062116IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
SMARTSM007177.600000111158118E-1666114IPR001005SANT, DNA-binding
PfamPF002491.1E-967111IPR014778Myb, DNA-binding
SuperFamilySSF466891.0E-1767146IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.7999988940408435E-1668116IPR012287Homeodomain-related