You are querying gene by "AT5G60450".

Locus: AT5G60450 Alias: ARF4

Hormone Evidence Function category Gene Description PMID
auxinMutant Hormone signal transduction transcription factor 16199616

Basic gene information ( show / hide contents )

Locus AT5G60450 | Chromosome: 5 | Strand: -
Description transcription factor
Alias
ARF4( alias )
Gene model
AT5G60450.1 | From: 24325548 | To: 24329924
Sequence
AT5G60450.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
transcription factor activity PMID: 11118137
cellular_component
nucleus PMID:
biological_process
regulation of transcription, DNA-dependent PMID:
abaxial cell fate specification PMID: 16199616
vegetative phase change PMID: 16818444
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   auxin   ]

Genotype PMID Type
arf4-1 16199616 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT5G60450.1 
length: 3114 
miRNA : ath-miR472
length: 22 
 
mfe: -28.4 kcal/mol 
p-value: 0.011495 
 
position  568 
target 5' U      A  A             G 
           GUA GG GU GGAGUAGGAGGAG  
           CAU CC CG CCUCAUCCUUUUU  
miRNA  3' C   A                     
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT5G60450AT1G74740PositivetransciptN/Amolecular18599455
AT5G60450AT2G14610negativetransciptN/Abiochem17276977
AT5G60450AT4G30610PositivetransciptN/AGO/othersN/A
AT5G60450AT5G18560PositivetransciptN/Amutance17630277
AT5G60450CBF/DREBnegativetransciptN/Abiochem17276977

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_91674
AccessionTaxon
NP_200853 ( AT5G60450 )Arabidopsis thaliana
30111.m000734Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF023626.500000000000006E-20177278IPR003340Transcriptional factor B3
PROSITEPS508630.0177279IPR003340Transcriptional factor B3
PfamPF065071.9000000000000044E-33302383IPR010525Auxin response factor
PfamPF023093.500000000000003E-18659752IPR003311AUX/IAA protein
PROSITEPS509620.0666748IPR011525Aux/IAA-ARF-dimerisation