You are querying gene by "AT5G59780".

Locus: AT5G59780 Alias: AtMYB59

Hormone Evidence Function category Gene Description PMID
ethyleneGeneOntology - response to ethylene stimulus 16463103
salicylic acidGeneOntology - response to salicylic acid stimulus 16463103
auxinGeneOntology - response to auxin stimulus 16463103
jasmonic acidGeneOntology - response to jasmonic acid stimulus 16463103
gibberellinGeneOntology - response to gibberellin stimulus 16463103

Basic gene information ( show / hide contents )

Locus AT5G59780 | Chromosome: 5 | Strand: -
Description response to auxin stimulus
AtMYB59( alias )
MYB59( alias )
Gene model
AT5G59780.1 | From: 24099423 | To: 24100657
AT5G59780.3 | From: 24099423 | To: 24100612
AT5G59780.2 | From: 24099423 | To: 24100643
AT5G59780.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT5G59780.3 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT5G59780.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
DNA binding PMID:
transcription factor activity PMID: 11118137
response to auxin stimulus PMID: 16463103
regulation of transcription, DNA-dependent PMID:
response to jasmonic acid stimulus PMID: 16463103
response to gibberellin stimulus PMID: 16463103
response to ethylene stimulus PMID: 16463103
response to salicylic acid stimulus PMID: 16463103
response to cadmium ion PMID: 16463103
response to salt stress PMID: 16463103
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT5G59780.1 
length: 1128 
miRNA : ath-miR159a
length: 21 
mfe: -25.2 kcal/mol 
p-value: 0.032260 
position  884 
target 5' G   U G  G             A 
miRNA  3'     U G                  
target: AT5G59780.2 
length: 1035 
miRNA : ath-miR159a
length: 21 
mfe: -25.2 kcal/mol 
p-value: 0.029219 
position  791 
target 5' G   U G  G             A 
miRNA  3'     U G                  
target: AT5G59780.3 
length: 1010 
miRNA : ath-miR159a
length: 21 
mfe: -25.2 kcal/mol 
p-value: 0.028398 
position  766 
target 5' G   U G  G             A 
miRNA  3'     U G                  

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_33908
NP_001030816Arabidopsis thaliana
NP_001078249Arabidopsis thaliana
NP_190199Arabidopsis thaliana
NP_851225 ( AT5G59780 )Arabidopsis thaliana
NP_851226Arabidopsis thaliana
NP_200786Arabidopsis thaliana
NP_001067061Oryza sativa Japonica Group
NP_001068517Oryza sativa Japonica Group
29788.m000340Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR106411.2000011745813985E-441168IPR015495Myb transcription factor
SMARTSM007171.8000014928719636E-12145IPR001005SANT, DNA-binding
PROSITEPS512940.0147IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
PfamPF002491.3000000000000007E-11243IPR014778Myb, DNA-binding
PROSITEPS5129416.980557IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
PANTHERPTHR106411e-876233IPR015495Myb transcription factor
SMARTSM007171.8e-15959IPR001005SANT, DNA-binding
PfamPF002491.9e-151057IPR014778Myb, DNA-binding
PANTHERPTHR106413.600020150309944E-6818212IPR015495Myb transcription factor
PROSITEPS512940.03791IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
SMARTSM007171.2000011745813376E-174189IPR001005SANT, DNA-binding
PfamPF002491.2000000000000005E-124287IPR014778Myb, DNA-binding
PROSITEPS5129427.81458112IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
SMARTSM007172.2e-1762110IPR001005SANT, DNA-binding
PfamPF002491.8e-1563108IPR014778Myb, DNA-binding