You are querying gene by "AT5G58220".

Locus: AT5G58220 Alias: TTL

Hormone Evidence Function category Gene Description PMID
brassinosteroidMutant Hormone signal transduction BRI1 interaction protein,Transthyretin-Like protein 14977918
GeneOntology - brassinosteroid mediated signaling 15319482

Basic gene information ( show / hide contents )

Locus AT5G58220 | Chromosome: 5 | Strand: -
Description BRI1 interaction protein,Transthyretin-Like protein
Alias
TTL( alias )
Gene model
AT5G58220.1 | From: 23571622 | To: 23573107
AT5G58220.2 | From: 23571626 | To: 23573107
AT5G58220.3 | From: 23571612 | To: 23573109
Sequence
AT5G58220.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT5G58220.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT5G58220.3 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
steroid binding PMID:
cellular_component
extrinsic to internal side of plasma membrane PMID: 15319482
biological_process
regulation of cell growth by extracellular stimulus PMID: 15319482
brassinosteroid mediated signaling PMID: 15319482
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   brassinosteroid   ]

Genotype PMID Type
ttl-1 14977918 mutant
ttl-2 14977918 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT5G58220.1 
length: 1145 
miRNA : ath-miR836
length: 24 
 
mfe: -30.4 kcal/mol 
p-value: 0.005457 
 
position  391 
target 5' U                 G   U  A 
           CCAUGCGUUAAAGGAAA GUA GA  
           GGUGCGUAGUUUCCUUU UGU CU  
miRNA  3'                   G   C    
 
 
target: AT5G58220.2 
length: 1027 
miRNA : ath-miR836
length: 24 
 
mfe: -30.4 kcal/mol 
p-value: 0.004745 
 
position  391 
target 5' U                 G   U  A 
           CCAUGCGUUAAAGGAAA GUA GA  
           GGUGCGUAGUUUCCUUU UGU CU  
miRNA  3'                   G   C    
 
 
target: AT5G58220.3 
length: 1118 
miRNA : ath-miR836
length: 24 
 
mfe: -30.4 kcal/mol 
p-value: 0.005294 
 
position  393 
target 5' U                 G   U  A 
           CCAUGCGUUAAAGGAAA GUA GA  
           GGUGCGUAGUUUCCUUU UGU CU  
miRNA  3'                   G   C    
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT5G58220AT1G16390negativeotherN/Amolecular16672972
AT5G58220AT2G30980negativeotherN/Amolecular16672972

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_13841
AccessionTaxon
NP_001032093Arabidopsis thaliana
NP_001032094Arabidopsis thaliana
NP_200630 ( AT5G58220 )Arabidopsis thaliana
139658Chlamydomonas reinhardtii
NP_001050277Oryza sativa Japonica Group
estExt_gwp_gw1.C_1900047Physcomitrella patens subsp. patens
29709.m001230Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PIRPIRSF0371780.01311IPR017129Bifunctional hydroxyisourate hydrolase/2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase
PIRPIRSF0371783.8e-2971324IPR017129Bifunctional hydroxyisourate hydrolase/2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase
PIRPIRSF0371780.01286IPR017129Bifunctional hydroxyisourate hydrolase/2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase
PfamPF093491.9999999999999946E-2913156IPR018020Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase
PfamPF093492.8e-3213156IPR018020Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase
PfamPF093491.6000000000000007E-2913156IPR018020Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase
Gene3DG3DSA:2.60.40.1807.000007341299065E-15173282IPR000895Transthyretin/hydroxyisourate hydrolase
PfamPF005761.4999999999999958E-24181285IPR000895Transthyretin/hydroxyisourate hydrolase
SuperFamilySSF494722.2E-20181286IPR000895Transthyretin/hydroxyisourate hydrolase
TIGRFAMTIGR029621.0E-31190311IPR014306Hydroxyisourate hydrolase
SuperFamilySSF494721.0E-30190311IPR000895Transthyretin/hydroxyisourate hydrolase
Gene3DG3DSA:2.60.40.1802.10000267834025E-24191307IPR000895Transthyretin/hydroxyisourate hydrolase
PRINTSPR001892.199999009807084E-8192212IPR000895Transthyretin/hydroxyisourate hydrolase
PfamPF005765.4999999999999514E-33192310IPR000895Transthyretin/hydroxyisourate hydrolase
PROSITEPS007680.0196211IPR000895Transthyretin/hydroxyisourate hydrolase
TIGRFAMTIGR029621.7e-35203324IPR014306Hydroxyisourate hydrolase
SuperFamilySSF494721e-30203324IPR000895Transthyretin/hydroxyisourate hydrolase
Gene3DG3DSA:2.60.40.1802e-24204320IPR000895Transthyretin/hydroxyisourate hydrolase
PRINTSPR001892.3e-08205225IPR000895Transthyretin/hydroxyisourate hydrolase
PfamPF005767.6e-36205323IPR000895Transthyretin/hydroxyisourate hydrolase
PROSITEPS00768NA209224IPR000895Transthyretin/hydroxyisourate hydrolase
PROSITEPS007690.0269281IPR000895Transthyretin/hydroxyisourate hydrolase
PRINTSPR001892.199999009807084E-8289311IPR000895Transthyretin/hydroxyisourate hydrolase
PROSITEPS007690.0294306IPR000895Transthyretin/hydroxyisourate hydrolase
PRINTSPR001892.3e-08302324IPR000895Transthyretin/hydroxyisourate hydrolase
PROSITEPS00769NA307319IPR000895Transthyretin/hydroxyisourate hydrolase