You are querying gene by "AT5G56970".

Locus: AT5G56970 Alias: ATCKX3

Hormone Evidence Function category Gene Description PMID
cytokininTransgenic Hormone metabolism It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. 14555694
GeneOntology - cytokinin dehydrogenase activity 14555694

Basic gene information ( show / hide contents )

Locus AT5G56970 | Chromosome: 5 | Strand: -
Description It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.
Alias
ATCKX3( alias )
CKX3( alias )
Gene model
AT5G56970.1 | From: 23062170 | To: 23065494
Sequence
AT5G56970.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
cytokinin dehydrogenase activity PMID: 14555694
amine oxidase activity PMID: 11154345
cellular_component
vacuole PMID: 14555694
biological_process
cytokinin catabolic process PMID: 11154345
KEGG pathway This gene participates in 1 pathways:
Pathway Enzyme
Other enzymes cytokinin dehydrogenase
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   cytokinin   ]

Genotype PMID Type
35S:AtCKX3 14555694 transgenic

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT5G56970.1 
length: 1595 
miRNA : ath-miR867
length: 21 
 
mfe: -21.6 kcal/mol 
p-value: 0.025961 
 
position  389 
target 5' G   A          G A    G 
           UCC UGGUAAACCG G UCGA  
           AGG AUUAUUUGGU C AGUU  
miRNA  3' A              A A      
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT5G56970iPnegativemetabolismN/Atransgenic14555694

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_70649
AccessionTaxon
NP_200507 ( AT5G56970 )Arabidopsis thaliana
29912.m005334Ricinus communis
30169.m006344Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF561762.3e-4441243IPR016166FAD-binding, type 2
PROSITEPS5138716.58366243IPR016166FAD-binding, type 2
PfamPF015651.3e-2370212IPR006094FAD linked oxidase, N-terminal
PROSITEPS00862NA70105IPR006093Oxygen oxidoreductase covalent FAD-binding site
PfamPF092655.9e-117244517IPR015345Cytokinin dehydrogenase 1, FAD/cytokinin binding domain
SuperFamilySSF551031.7e-82244518IPR016164FAD-linked oxidase-like, C-terminal