You are querying gene by "AT5G55540".

Locus: AT5G55540 Alias: LOP1

Hormone Evidence Function category Gene Description PMID
auxinGeneOntology - auxin polar transport 16531491

Basic gene information ( show / hide contents )

Locus AT5G55540 | Chromosome: 5 | Strand: -
Description auxin polar transport
LOP1( alias )
TRN1( alias )
Gene model
AT5G55540.1 | From: 22513422 | To: 22517769
AT5G55540.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function_unknown PMID:
cellular_component_unknown PMID:
multidimensional cell growth PMID: 8674420
auxin polar transport PMID: 16531491
leaf vascular tissue pattern formation PMID: 16531491
radial pattern formation PMID: 10887093
leaf morphogenesis PMID: 8674420
meristem organization PMID: 10887093
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT5G55540.1 
length: 4269 
miRNA : ath-miR2112-5p
length: 21 
mfe: -24.1 kcal/mol 
p-value: 0.026402 
position  619 
target 5' C             U U    G U 
miRNA  3' U                    G   

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_59016
NP_200365 ( AT5G55540 )Arabidopsis thaliana
estExt_fgenesh1_pg.C_3560006Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_670111Physcomitrella patens subsp. patens
27613.m000634Ricinus communis

No related Cross Link information for this gene.