You are querying gene by "AT5G55250".

Locus: AT5G55250 Alias: IAMT1

Hormone Evidence Function category Gene Description PMID
auxinMutant Hormone metabolism 16169896

Basic gene information ( show / hide contents )

Locus AT5G55250 | Chromosome: 5 | Strand: -
IAMT1( alias )
Gene model
AT5G55250.1 | From: 22424699 | To: 22428170
AT5G55250.2 | From: 22424699 | To: 22427907
AT5G55250.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT5G55250.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
S-adenosylmethionine-dependent methyltransferase activity PMID: 11287667
indole acetic acid carboxyl methyltransferase activity PMID: 16169896
cellular_component_unknown PMID:
polarity specification of adaxial/abaxial axis PMID: 16169896
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   auxin   ]

Genotype PMID Type
iamt1-D 16169896 mutant

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT5G55250.1 
length: 1367 
miRNA : ath-miR837-5p
length: 21 
mfe: -21.9 kcal/mol 
p-value: 0.071039 
position  632 
target 5' G  U              C  C 
miRNA  3'    U              A  A 
target: AT5G55250.2 
length: 1264 
miRNA : ath-miR837-5p
length: 21 
mfe: -21.9 kcal/mol 
p-value: 0.066005 
position  529 
target 5' G  U              C  C 
miRNA  3'    U              A  A 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_37195
NP_001078756Arabidopsis thaliana
NP_200336 ( AT5G55250 )Arabidopsis thaliana
NP_001054175Oryza sativa Japonica Group
29640.m000416Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF034925.099999999999925E-10811346IPR005299SAM dependent carboxyl methyltransferase
PfamPF034927.5E-10849384IPR005299SAM dependent carboxyl methyltransferase