You are querying gene by "AT5G54510".

Locus: AT5G54510 Alias: DFL1

Hormone Evidence Function category Gene Description PMID
auxinMutant Hormone metabolism 11169197
GeneOntology - response to auxin stimulus 15659623

Basic gene information ( show / hide contents )

Locus AT5G54510 | Chromosome: 5 | Strand: -
Description
Alias
DFL1( alias )
GH3.6( alias )
Gene model
AT5G54510.1 | From: 22148319 | To: 22150904
Sequence
AT5G54510.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
indole-3-acetic acid amido synthetase PMID: 15659623
cellular_component
cytoplasm PMID: 11169197
biological_process
response to auxin stimulus PMID: 15659623
unidimensional cell growth PMID: 11169197
auxin homeostasis PMID: 15659623
auxin mediated signaling pathway PMID: 11169197
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   auxin   ]

Genotype PMID Type
dfl1-D 11169197 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT5G54510.1 
length: 2181 
miRNA : ath-miR782
length: 21 
 
mfe: -24.8 kcal/mol 
p-value: 0.027780 
 
position  1827 
target 5' C                 G  A 
           AAG ACA CCAAGGUGU UG  
           UUC UGU GGUUCCACA AC  
miRNA  3'     U   A         A  A 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_14809
AccessionTaxon
NP_001031874Arabidopsis thaliana
NP_174134Arabidopsis thaliana
NP_196839Arabidopsis thaliana
NP_196840Arabidopsis thaliana
NP_196841Arabidopsis thaliana
NP_196842Arabidopsis thaliana
NP_001044345Oryza sativa Japonica Group
NP_001044467Oryza sativa Japonica Group
NP_001055967Oryza sativa Japonica Group
NP_001060084Oryza sativa Japonica Group
NP_001060085Oryza sativa Japonica Group
NP_001060163Oryza sativa Japonica Group
27533.m000079Ricinus communis
28152.m000872Ricinus communis
29970.m001008Ricinus communis
30128.m008575Ricinus communis
30129.m000366Ricinus communis
NP_173729Arabidopsis thaliana
NP_175299Arabidopsis thaliana
NP_196836Arabidopsis thaliana
NP_199960Arabidopsis thaliana
NP_176159Arabidopsis thaliana
NP_179101Arabidopsis thaliana
NP_179898Arabidopsis thaliana
NP_182296Arabidopsis thaliana
NP_194456Arabidopsis thaliana
NP_195455Arabidopsis thaliana
NP_200262 ( AT5G54510 )Arabidopsis thaliana
NP_849718Arabidopsis thaliana
estExt_Genewise1.C_3230045Physcomitrella patens subsp. patens
NP_175300Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF033213.4e-20924583IPR004993GH3 auxin-responsive promoter