You are querying gene by "AT5G54190".

Locus: AT5G54190 Alias: PORA

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT5G54190 | Chromosome: 5 | Strand: -
Description light-dependent NADPH:protochlorophyllide oxidoreductase A
PORA( alias )
Gene model
AT5G54190.1 | From: 22008225 | To: 22010038
AT5G54190.2 | From: 22008138 | To: 22010038
AT5G54190.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT5G54190.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
protochlorophyllide reductase activity PMID: 7659751
oxidoreductase activity PMID:
chloroplast PMID: 8624514
chlorophyll biosynthetic process PMID: 7659751
KEGG pathway This gene participates in 1 pathways:
Pathway Enzyme
Porphyrin and chlorophyll metabolism protochlorophyllide reductase
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT5G54190.1 
length: 1441 
miRNA : ath-miR843
length: 21 
mfe: -24.8 kcal/mol 
p-value: 0.033279 
position  1239 
target 5' G  C                 A 
miRNA  3' A  U  C                
target: AT5G54190.2 
length: 1610 
miRNA : ath-miR843
length: 21 
mfe: -24.8 kcal/mol 
p-value: 0.038157 
position  1321 
target 5' G  C                 A 
miRNA  3' A  U  C                

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_19085
NP_001030948Arabidopsis thaliana
NP_171860Arabidopsis thaliana
136589Chlamydomonas reinhardtii
estExt_fgenesh2_kg.C_1460002Physcomitrella patens subsp. patens
fgenesh2_kg.scaffold_108000004Physcomitrella patens subsp. patens
29983.m003226Ricinus communis
NP_001031731Arabidopsis thaliana
NP_194474Arabidopsis thaliana
NP_200230 ( AT5G54190 )Arabidopsis thaliana
NP_001054274Oryza sativa Japonica Group
fgenesh1_pm.C_Chr_07.0001000025Ostreococcus tauri
28460.m000082Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA: domain
PANTHERPTHR194100.01251IPR002198Short-chain dehydrogenase/reductase SDR
TIGRFAMTIGR012890.01284IPR005979Light-dependent protochlorophyllide reductase
PfamPF001066.400000000000005E-511114IPR002198Short-chain dehydrogenase/reductase SDR
PANTHERPTHR194109.7e-18576372IPR002198Short-chain dehydrogenase/reductase SDR
Gene3DG3DSA: domain
TIGRFAMTIGR012897.6e-24790405IPR005979Light-dependent protochlorophyllide reductase
PRINTSPR000817.6e-0894111IPR002347Glucose/ribitol dehydrogenase
PfamPF001061.4e-1994235IPR002198Short-chain dehydrogenase/reductase SDR
PRINTSPR000817.6e-08169180IPR002347Glucose/ribitol dehydrogenase
PRINTSPR000817.6e-08302319IPR002347Glucose/ribitol dehydrogenase