You are querying gene by "AT5G52660".

Locus: AT5G52660 Alias: AT5G52660

Hormone Evidence Function category Gene Description PMID
ethyleneGeneOntology - response to ethylene stimulus 16463103
salicylic acidGeneOntology - response to salicylic acid stimulus 16463103
abscisic acidGeneOntology - response to abscisic acid stimulus 16463103
gibberellinGeneOntology - response to gibberellin stimulus 16463103
jasmonic acidGeneOntology - response to jasmonic acid stimulus 16463103

Basic gene information ( show / hide contents )

Locus AT5G52660 | Chromosome: 5 | Strand: -
Description response to jasmonic acid stimulus
Alias
AT5G52660( alias )
AT5G52660( alias )
AT5G52660( alias )
AT5G52660( alias )
AT5G52660( alias )
Gene model
AT5G52660.1 | From: 21376285 | To: 21379386
AT5G52660.2 | From: 21376285 | To: 21379386
Sequence
AT5G52660.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT5G52660.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
transcription factor activity PMID: 11118137
biological_process
regulation of transcription, DNA-dependent PMID:
response to gibberellin stimulus PMID: 16463103
response to jasmonic acid stimulus PMID: 16463103
response to ethylene stimulus PMID: 16463103
response to abscisic acid stimulus PMID: 16463103
response to salicylic acid stimulus PMID: 16463103
response to cadmium ion PMID: 16463103
response to salt stress PMID: 16463103
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

No miRNA interaction information for this gene.

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_18786
AccessionTaxon
NP_001030662Arabidopsis thaliana
NP_001031823Arabidopsis thaliana
NP_187571Arabidopsis thaliana
NP_568108Arabidopsis thaliana
NP_850756Arabidopsis thaliana
123164Chlamydomonas reinhardtii
fgenesh1_pg.scaffold_198000070Physcomitrella patens subsp. patens
gw1.46.107.1Physcomitrella patens subsp. patens
29805.m001497Ricinus communis
NP_568776Arabidopsis thaliana
NP_851177 ( AT5G52660 )Arabidopsis thaliana
NP_001056559Oryza sativa Japonica Group
NP_001058324Oryza sativa Japonica Group
30169.m006616Ricinus communis
e_gw1.04.00.501.1Ostreococcus tauri
fgenesh1_pg.scaffold_160000002Physcomitrella patens subsp. patens
NP_001047742Oryza sativa Japonica Group
e_gw1.06.00.251.1Ostreococcus tauri
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF466893.3E-1566124IPR009057Homeodomain-like
SuperFamilySSF466893.3E-1566124IPR009057Homeodomain-like
PROSITEPS512940.067121IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
PROSITEPS512940.067121IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
TIGRFAMTIGR015573.000000679928713E-2370120IPR006447Myb-like DNA-binding domain, SHAQKYF class
TIGRFAMTIGR015573.000000679928713E-2370120IPR006447Myb-like DNA-binding domain, SHAQKYF class
SMARTSM007175.500005465099994E-1071119IPR001005SANT, DNA-binding
SMARTSM007175.500005465099994E-1071119IPR001005SANT, DNA-binding
PfamPF002495.799999999999996E-772116IPR014778Myb, DNA-binding
PfamPF002495.799999999999996E-772116IPR014778Myb, DNA-binding