You are querying gene by "AT5G52310".

Locus: AT5G52310 Alias: COR78

Hormone Evidence Function category Gene Description PMID
abscisic acidGeneOntology - response to abscisic acid stimulus 16463099

Basic gene information ( show / hide contents )

Locus AT5G52310 | Chromosome: 5 | Strand: +
Description cold regulated gene, the 5' region of cor78 has cis-acting regulatory elements that can impart cold-regulated gene expression; RESPONSIVE TO DESSICATION 29A;
COR78( alias )
LTI140( alias )
LTI78( alias )
RD29A( alias )
Gene model
AT5G52310.1 | From: 21258075 | To: 21260839
AT5G52310.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function_unknown PMID:
cellular_component_unknown PMID:
response to water deprivation PMID: 16463099
response to osmotic stress PMID: 11779861
response to cold PMID: 8448363
response to salt stress PMID: 16463099
hyperosmotic salinity response PMID: 8148648
response to abscisic acid stimulus PMID: 16463099
response to desiccation PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT5G52310.1 
length: 2500 
miRNA : ath-miR837-5p
length: 21 
mfe: -21.4 kcal/mol 
p-value: 0.146288 
position  1699 
target 5' A     A   U        A  G 
miRNA  3'       G            A  A 
target: AT5G52310.1 
length: 2500 
miRNA : ath-miR837-5p
length: 21 
mfe: -22.4 kcal/mol 
p-value: 0.098032 
position  999 
target 5' G U      U           G 
miRNA  3' A U            U     A 
target: AT5G52310.1 
length: 2500 
miRNA : ath-miR838
length: 21 
mfe: -24.6 kcal/mol 
p-value: 0.026803 
position  1965 
target 5' G       C            A 
miRNA  3' A   G   U              

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_45062
NP_001032061Arabidopsis thaliana
NP_194288Arabidopsis thaliana
NP_200043Arabidopsis thaliana
NP_200044 ( AT5G52310 )Arabidopsis thaliana
NP_001065009Oryza sativa Japonica Group
30147.m013744Ricinus communis

No related Cross Link information for this gene.