You are querying gene by "AT5G51640".

Locus: AT5G51640 Alias: YLS7

Hormone Evidence Function category Gene Description PMID
ethyleneGeneOntology - response to ethylene stimulus 11230571
abscisic acidGeneOntology - response to abscisic acid stimulus 11230571

Basic gene information ( show / hide contents )

Locus AT5G51640 | Chromosome: 5 | Strand: -
Description response to abscisic acid stimulus
Alias
YLS7( alias )
Gene model
AT5G51640.1 | From: 20992406 | To: 20994851
Sequence
AT5G51640.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
biological_process
leaf senescence PMID: 11230571
response to ethylene stimulus PMID: 11230571
senescence PMID: 11230571
response to abscisic acid stimulus PMID: 11230571
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT5G51640.1 
length: 1830 
miRNA : ath-miR169a
length: 21 
 
mfe: -28.8 kcal/mol 
p-value: 0.008265 
 
position  861 
target 5' C    A  U               G 
           UCGG UG GGUCAUCUU GGCUG  
           AGCC GU UCAGUAGGA CCGAC  
miRNA  3'                   A       
 
 
target: AT5G51640.1 
length: 1830 
miRNA : ath-miR2938
length: 21 
 
mfe: -25.8 kcal/mol 
p-value: 0.046131 
 
position  649 
target 5' A   A    G      U U    U 
           UGG AACC UCUCAG G GAUC  
           ACC UUGG AGAGUU U CUAG  
miRNA  3' G        G      U        
 
 
target: AT5G51640.1 
length: 1830 
miRNA : ath-miR778
length: 21 
 
mfe: -25.2 kcal/mol 
p-value: 0.021624 
 
position  921 
target 5' A      A        U      U 
           UGGUGU AC UAAAC CAAGCU  
           GCCACA UG AUUUG GUUCGG  
miRNA  3'           U            U 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_45052
AccessionTaxon
NP_001031712Arabidopsis thaliana
NP_194266Arabidopsis thaliana
NP_199977 ( AT5G51640 )Arabidopsis thaliana
NP_001045183Oryza sativa Japonica Group
e_gw1.424.1.1Physcomitrella patens subsp. patens
30147.m014176Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF030055.599999999999994E-37304488IPR004253Protein of unknown function DUF231, plant