You are querying gene by "AT5G50720".

Locus: AT5G50720 Alias: ATHVA22E

Hormone Evidence Function category Gene Description PMID
abscisic acidGeneOntology - response to abscisic acid stimulus 12081371

Basic gene information ( show / hide contents )

Locus AT5G50720 | Chromosome: 5 | Strand: -
Description response to abscisic acid stimulus
ATHVA22E( alias )
Gene model
AT5G50720.1 | From: 20650419 | To: 20651778
AT5G50720.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function_unknown PMID:
endomembrane system PMID:
response to water deprivation PMID: 12081371
response to cold PMID: 12081371
hyperosmotic salinity response PMID: 12081371
response to abscisic acid stimulus PMID: 12081371
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT5G50720.1 
length: 650 
miRNA : ath-miR1886.1
length: 21 
mfe: -25.9 kcal/mol 
p-value: 0.002826 
position  475 
target 5' U                   U 
miRNA  3' C                   U 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_10829
NP_195390Arabidopsis thaliana
143837Chlamydomonas reinhardtii
29646.m001069Ricinus communis
NP_001119048Arabidopsis thaliana
NP_567713Arabidopsis thaliana
NP_568744 ( AT5G50720 )Arabidopsis thaliana
NP_001067939Oryza sativa Japonica Group
estExt_Genewise1.C_4210010Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_4210007Physcomitrella patens subsp. patens
estExt_fgenesh1_pm.C_3060012Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_25000037Physcomitrella patens subsp. patens
NP_001068230Oryza sativa Japonica Group
0900010006Ostreococcus tauri
gw1.125.32.1Physcomitrella patens subsp. patens
NP_177592Arabidopsis thaliana
estExt_Genewise1.C_3060059Physcomitrella patens subsp. patens
30147.m014111Ricinus communis
NP_001048116Oryza sativa Japonica Group
NP_001057204Oryza sativa Japonica Group
NP_181810Arabidopsis thaliana
estExt_gwp_gw1.C_600026Physcomitrella patens subsp. patens
29993.m001046Ricinus communis
NP_001060029Oryza sativa Japonica Group
30147.m014467Ricinus communis
NP_001062004Oryza sativa Japonica Group
NP_001052759Oryza sativa Japonica Group
NP_001066204Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF031345e-3212100IPR004345TB2/DP1/HVA22 related protein
PANTHERPTHR123002.6e-5615106IPR004345TB2/DP1/HVA22 related protein