You are querying gene by "AT5G50600".

Locus: AT5G50600 Alias: AtHSD1

Hormone Evidence Function category Gene Description PMID
abscisic acidGeneOntology - response to abscisic acid stimulus 17616511
brassinosteroidGeneOntology - response to brassinosteroid stimulus 17616511

Basic gene information ( show / hide contents )

Locus AT5G50600 | Chromosome: 5 | Strand: -
Description response to abscisic acid stimulus
AtHSD1( alias )
Gene model
AT5G50600.1 | From: 20606928 | To: 20608915
AT5G50600.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
oxidoreductase activity PMID:
endomembrane system PMID:
response to brassinosteroid stimulus PMID: 17616511
response to abscisic acid stimulus PMID: 17616511
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT5G50600.1 
length: 1301 
miRNA : ath-miR837-5p
length: 21 
mfe: -21.4 kcal/mol 
p-value: 0.084382 
position  659 
target 5' U                    G 
miRNA  3'         U      U     A 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_11495
NP_001154667Arabidopsis thaliana
NP_190319Arabidopsis thaliana
NP_190320Arabidopsis thaliana
NP_199871Arabidopsis thaliana
NP_680417Arabidopsis thaliana
NP_001052642Oryza sativa Japonica Group
NP_001066740Oryza sativa Japonica Group
30147.m014464Ricinus communis
NP_568742Arabidopsis thaliana
NP_680418 ( AT5G50600 )Arabidopsis thaliana
estExt_gwp_gw1.C_940053Physcomitrella patens subsp. patens
30147.m014465Ricinus communis
NP_001046935Oryza sativa Japonica Group
NP_001067940Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR194100.018287IPR002198Short-chain dehydrogenase/reductase SDR
Gene3DG3DSA: domain
PfamPF001064.1999999999999953E-2948214IPR002198Short-chain dehydrogenase/reductase SDR
PRINTSPR000815.699997087839525E-244966IPR002347Glucose/ribitol dehydrogenase
PRINTSPR000803.799998626447906E-8124135IPR002198Short-chain dehydrogenase/reductase SDR
PRINTSPR000815.699997087839525E-24124135IPR002347Glucose/ribitol dehydrogenase
PRINTSPR000815.699997087839525E-24171187IPR002347Glucose/ribitol dehydrogenase
PRINTSPR000803.799998626447906E-8177185IPR002198Short-chain dehydrogenase/reductase SDR
PROSITEPS000610.0184212IPR020904Short-chain dehydrogenase/reductase, conserved site
PRINTSPR000803.799998626447906E-8197216IPR002198Short-chain dehydrogenase/reductase SDR
PRINTSPR000815.699997087839525E-24197216IPR002347Glucose/ribitol dehydrogenase
PRINTSPR000815.699997087839525E-24217234IPR002347Glucose/ribitol dehydrogenase