You are querying gene by "AT5G49620".

Locus: AT5G49620 Alias: AtMYB78

Hormone Evidence Function category Gene Description PMID
abscisic acidGeneOntology - response to abscisic acid stimulus 16258012

Basic gene information ( show / hide contents )

Locus AT5G49620 | Chromosome: 5 | Strand: -
Description response to abscisic acid stimulus
AtMYB78( alias )
Gene model
AT5G49620.1 | From: 20154620 | To: 20156610
AT5G49620.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
DNA binding PMID:
transcription factor activity PMID: 11118137
regulation of transcription, DNA-dependent PMID:
response to salt stress PMID: 16463103
response to abscisic acid stimulus PMID: 16258012
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT5G49620.1 
length: 1021 
miRNA : ath-miR776
length: 21 
mfe: -21.8 kcal/mol 
p-value: 0.032800 
position  92 
target 5' G    G                 G 
miRNA  3'           A              

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_51500
NP_187301Arabidopsis thaliana
NP_199773 ( AT5G49620 )Arabidopsis thaliana
NP_001042810Oryza sativa Japonica Group
NP_001054560Oryza sativa Japonica Group
30076.m004607Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR106418.100007343233418E-8722286IPR015495Myb transcription factor
PROSITEPS512940.02379IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
SMARTSM007172.79999889404114E-152777IPR001005SANT, DNA-binding
PfamPF002492.8999999999999994E-122875IPR014778Myb, DNA-binding
SMARTSM007175.2000008900333613E-1480128IPR001005SANT, DNA-binding
PROSITEPS512940.080130IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
PfamPF002493.900000000000007E-1181124IPR014778Myb, DNA-binding