You are querying gene by "AT5G49570".

Locus: AT5G49570 Alias: AtPNG1

Hormone Evidence Function category Gene Description PMID
salicylic acidGeneOntology - response to salicylic acid stimulus 17666024

Basic gene information ( show / hide contents )

Locus AT5G49570 | Chromosome: 5 | Strand: -
Description response to salicylic acid stimulus
Alias
AtPNG1( alias )
Gene model
AT5G49570.1 | From: 20129085 | To: 20133411
Sequence
AT5G49570.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity PMID: 17666024
catalytic activity PMID:
cellular_component
cytosol PMID: 17666024
biological_process
response to salicylic acid stimulus PMID: 17666024
response to microbial phytotoxin PMID: 17666024
response to ozone PMID: 17666024
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT5G49570.1 
length: 2438 
miRNA : ath-miR400
length: 21 
 
mfe: -21.9 kcal/mol 
p-value: 0.026976 
 
position  2222 
target 5' A       A       A      C 
           GUGAUUU AUGAUGC UUCAUG  
           CACUGAA UAUUAUG GAGUAU  
miRNA  3'                 A        
 
 
target: AT5G49570.1 
length: 2438 
miRNA : ath-miR866-3p
length: 20 
 
mfe: -23.8 kcal/mol 
p-value: 0.024567 
 
position  1021 
target 5' A    U         G     G 
           UUUC AAGGACGGG UUUGU  
           GAAG UUUCUGCCU AAACA  
miRNA  3' A              A       
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_13478
AccessionTaxon
NP_199768 ( AT5G49570 )Arabidopsis thaliana
NP_001059707Oryza sativa Japonica Group
1400010236Ostreococcus tauri
e_gw1.337.36.1Physcomitrella patens subsp. patens
30128.m008605Ricinus communis
146964Chlamydomonas reinhardtii
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SMARTSM004605.1e-13243298IPR002931Transglutaminase-like
PfamPF038355.9e-14278366IPR018325DNA repair protein Rad4, transglutaminase-like domain
SuperFamilySSF497851.2e-08574717IPR008979Galactose-binding domain-like