You are querying gene by "AT5G48870".

Locus: AT5G48870 Alias: SAD1

Hormone Evidence Function category Gene Description PMID
abscisic acidMutant Hormone signal transduction encodes a polypeptide similar to multifunctional sm-like U6 small nuclear ribonucleoproteins, supersensitive to ABA and drought1(sad1) 11740939
GeneOntology - response to abscisic acid stimulus 11740939

Basic gene information ( show / hide contents )

Locus AT5G48870 | Chromosome: 5 | Strand: +
Description encodes a polypeptide similar to multifunctional sm-like U6 small nuclear ribonucleoproteins, supersensitive to ABA and drought1(sad1)
Alias
SAD1( alias )
Gene model
AT5G48870.1 | From: 19830564 | To: 19831780
Sequence
AT5G48870.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
RNA binding PMID: 11740939
cellular_component
nucleus PMID:
small nucleolar ribonucleoprotein complex PMID:
biological_process
response to water deprivation PMID: 11740939
response to abscisic acid stimulus PMID: 11740939
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   abscisic acid   ]

Genotype PMID Type
sad1 11740939 mutant
sad1-1 11740939 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

No miRNA interaction information for this gene.

Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT5G48870ABRESnegativeotherN/Amutance11740939
AT5G48870AT1G20440negativeotherN/Amutance11740939
AT5G48870AT2G38050negativeotherN/Amutance11740939
AT5G48870AT3G23050negativeotherN/Amutance11740939
AT5G48870AT3G63210negativeotherN/Amutance11740939

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_12544
AccessionTaxon
NP_199698 ( AT5G48870 )Arabidopsis thaliana
58042Chlamydomonas reinhardtii
NP_001055432Oryza sativa Japonica Group
0700010289Ostreococcus tauri
estExt_Genewise1.C_280109Physcomitrella patens subsp. patens
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF501829.3E-20788IPR010920Like-Sm ribonucleoprotein (LSM)-related domain
SMARTSM006517.199995576545489E-211280IPR006649Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type
PfamPF014236.3000000000000046E-151480IPR001163Like-Sm ribonucleoprotein (LSM) domain