You are querying gene by "AT5G47390".

Locus: AT5G47390 Alias: AT5G47390

Hormone Evidence Function category Gene Description PMID
ethyleneGeneOntology - response to ethylene stimulus 16463103
salicylic acidGeneOntology - response to salicylic acid stimulus 16463103
abscisic acidGeneOntology - response to abscisic acid stimulus 16463103
gibberellinGeneOntology - response to gibberellin stimulus 16463103
jasmonic acidGeneOntology - response to jasmonic acid stimulus 16463103

Basic gene information ( show / hide contents )

Locus AT5G47390 | Chromosome: 5 | Strand: +
Description response to jasmonic acid stimulus
Alias
AT5G47390( alias )
AT5G47390( alias )
AT5G47390( alias )
AT5G47390( alias )
AT5G47390( alias )
Gene model
AT5G47390.1 | From: 19244017 | To: 19246085
Sequence
AT5G47390.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
transcription factor activity PMID: 11118137
biological_process
response to salicylic acid stimulus PMID: 16463103
response to cadmium ion PMID: 16463103
response to salt stress PMID: 16463103
response to jasmonic acid stimulus PMID: 16463103
response to gibberellin stimulus PMID: 16463103
regulation of transcription PMID: 11118137
response to ethylene stimulus PMID: 16463103
response to abscisic acid stimulus PMID: 16463103
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

No miRNA interaction information for this gene.

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_27693
AccessionTaxon
NP_188256Arabidopsis thaliana
NP_001042254Oryza sativa Japonica Group
30146.m003509Ricinus communis
NP_199550 ( AT5G47390 )Arabidopsis thaliana
0600010132Ostreococcus tauri
e_gw1.89.66.1Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_1880060Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_70000111Physcomitrella patens subsp. patens
gw1.89.65.1Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_66000046Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_66000048Physcomitrella patens subsp. patens
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PROSITEPS501580.0320IPR001878Zinc finger, CCHC-type
SMARTSM003430.4700000041460714420IPR001878Zinc finger, CCHC-type
SuperFamilySSF466896.2E-1789149IPR009057Homeodomain-like
PROSITEPS512940.090146IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
TIGRFAMTIGR015571.3999989204987804E-2293145IPR006447Myb-like DNA-binding domain, SHAQKYF class
SMARTSM007172.000000752174565E-1194144IPR001005SANT, DNA-binding
PfamPF002495.899999999999997E-897141IPR014778Myb, DNA-binding