You are querying gene by "AT5G47220".

Locus: AT5G47220 Alias: ATERF-2

Hormone Evidence Function category Gene Description PMID
ethyleneGeneOntology - ethylene mediated signaling pathway 9687012

Basic gene information ( show / hide contents )

Locus AT5G47220 | Chromosome: 5 | Strand: -
Description ethylene mediated signaling pathway
Alias
ATERF-2( alias )
ATERF2( alias )
ERF2( alias )
Gene model
AT5G47220.1 | From: 19189089 | To: 19190050
Sequence
AT5G47220.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID: 10715325
transcription activator activity PMID: 16183832
transcription factor activity PMID: 10715325
cellular_component
nucleus PMID: 9687012
biological_process
ethylene mediated signaling pathway PMID: 9687012
positive regulation of transcription PMID: 10715325
regulation of transcription, DNA-dependent PMID: 10715325
induced systemic resistance, jasmonic acid mediated signaling pathway PMID: 16183832
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT5G47220.1 
length: 962 
miRNA : ath-miR414
length: 21 
 
mfe: -24.3 kcal/mol 
p-value: 0.006197 
 
position  731 
target 5' C U   A       C      A 
           G CGG GGUGGUG AGGUGA  
           C GCU CUACUAC UCUACU  
miRNA  3' A U   A       U        
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_30463
AccessionTaxon
NP_199533 ( AT5G47220 )Arabidopsis thaliana
NP_001047614Oryza sativa Japonica Group
NP_001053474Oryza sativa Japonica Group
e_gw1.265.11.1Physcomitrella patens subsp. patens
NP_567530Arabidopsis thaliana
205919Chlamydomonas reinhardtii
28192.m000255Ricinus communis
gw1.2.360.1Physcomitrella patens subsp. patens
gw1.2.361.1Physcomitrella patens subsp. patens
gw1.38.156.1Physcomitrella patens subsp. patens
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:3.30.730.104.900010277824081E-25115177IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
SuperFamilySSF541713.4E-25115177IPR016177DNA-binding, integrase-type
PfamPF008476.400000000000012E-14116166IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
SMARTSM003803.199998990463505E-41116180IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PROSITEPS510320.0116174IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003674.5000003473934684E-11117128IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003674.5000003473934684E-11140156IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding