You are querying gene by "AT5G47220".

Locus: AT5G47220 Alias: ATERF-2

Hormone Evidence Function category Gene Description PMID
ethyleneGeneOntology - ethylene mediated signaling pathway 9687012

Basic gene information ( show / hide contents )

Locus AT5G47220 | Chromosome: 5 | Strand: -
Description ethylene mediated signaling pathway
ATERF-2( alias )
ATERF2( alias )
ERF2( alias )
Gene model
AT5G47220.1 | From: 19189089 | To: 19190050
AT5G47220.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
DNA binding PMID: 10715325
transcription activator activity PMID: 16183832
transcription factor activity PMID: 10715325
nucleus PMID: 9687012
ethylene mediated signaling pathway PMID: 9687012
positive regulation of transcription PMID: 10715325
regulation of transcription, DNA-dependent PMID: 10715325
induced systemic resistance, jasmonic acid mediated signaling pathway PMID: 16183832
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT5G47220.1 
length: 962 
miRNA : ath-miR414
length: 21 
mfe: -24.3 kcal/mol 
p-value: 0.006197 
position  731 
target 5' C U   A       C      A 
miRNA  3' A U   A       U        

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_30463
NP_199533 ( AT5G47220 )Arabidopsis thaliana
NP_001047614Oryza sativa Japonica Group
NP_001053474Oryza sativa Japonica Group
e_gw1.265.11.1Physcomitrella patens subsp. patens
NP_567530Arabidopsis thaliana
205919Chlamydomonas reinhardtii
28192.m000255Ricinus communis
gw1.2.360.1Physcomitrella patens subsp. patens
gw1.2.361.1Physcomitrella patens subsp. patens
gw1.38.156.1Physcomitrella patens subsp. patens
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:3.30.730.104.900010277824081E-25115177IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
SuperFamilySSF541713.4E-25115177IPR016177DNA-binding, integrase-type
PfamPF008476.400000000000012E-14116166IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
SMARTSM003803.199998990463505E-41116180IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PROSITEPS510320.0116174IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003674.5000003473934684E-11117128IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003674.5000003473934684E-11140156IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding