You are querying gene by "AT5G42650".

Locus: AT5G42650 Alias: AOS

Hormone Evidence Function category Gene Description PMID
jasmonic acidMutant Hormone biosynthesis Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity. 12100478
GeneOntology - jasmonic acid biosynthetic process 12430030

Basic gene information ( show / hide contents )

Locus AT5G42650 | Chromosome: 5 | Strand: -
Description Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity.
Alias
AOS( alias )
CYP74A( alias )
Gene model
AT5G42650.1 | From: 17114823 | To: 17116623
Sequence
AT5G42650.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
hydro-lyase activity PMID: 8756596
allene oxide synthase activity PMID: 16831431
oxygen binding PMID: 8378325
cellular_component
chloroplast thylakoid membrane PMID: 15322131
plastoglobule PMID: 16414959
mitochondrion PMID: 14671022
chloroplast PMID: 8756596
biological_process
response to wounding PMID: 10420644
oxylipin metabolic process PMID: 16831431
defense response PMID: 16255250
jasmonic acid biosynthetic process PMID: 12430030
response to jasmonic acid stimulus PMID: 10420644
epoxygenase P450 pathway PMID: 8378325
KEGG pathway This gene participates in 1 pathways:
Pathway Enzyme
Other enzymes hydroperoxide dehydratase
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   jasmonic acid   ]

Genotype PMID Type
aos/dde2-2 12100478 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT5G42650.1 
length: 1801 
miRNA : ath-miR869.2
length: 21 
 
mfe: -24.9 kcal/mol 
p-value: 0.040066 
 
position  559 
target 5' C    G C       A      U 
           UCAA U AUCUCGA ACCGGA  
           AGUU A UAGAGUU UGGUCU  
miRNA  3' C    G         G        
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_34122
AccessionTaxon
NP_199079 ( AT5G42650 )Arabidopsis thaliana
NP_001051386Oryza sativa Japonica Group
estExt_Genewise1.C_970066Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_38000170Physcomitrella patens subsp. patens
30170.m013972Ricinus communis
NP_001049436Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:1.10.630.104.500010229028661E-4053493IPR001128Cytochrome P450
SuperFamilySSF482645.2E-4953493IPR001128Cytochrome P450
PfamPF000671.0E-14343493IPR001128Cytochrome P450
PANTHERPTHR193839.800002721303042E-17344492IPR001128Cytochrome P450