You are querying gene by "AT5G40990".

Locus: AT5G40990 Alias: GLIP1

Hormone Evidence Function category Gene Description PMID
ethyleneTransgenic Hormone signal transduction Component of plant resistance. Contains lipase signature motif and GDSL domain. Directly interferes with the fungal infection process by acting on fungal cell walls through its action as a antimicrobial compound. Critical component for both local and systemic resistance responses in the incompatible interaction with Alternaria brassicicola in the ethylene-dependent pathway. 19077166
salicylic acidTransgenic Hormone signal transduction Component of plant resistance. Contains lipase signature motif and GDSL domain. Directly interferes with the fungal infection process by acting on fungal cell walls through its action as a antimicrobial compound. Critical component for both local and systemic resistance responses in the incompatible interaction with Alternaria brassicicola in the ethylene-dependent pathway. 19077166
GeneOntology - response to salicylic acid stimulus 16126835

Basic gene information ( show / hide contents )

Locus AT5G40990 | Chromosome: 5 | Strand: +
Description response to salicylic acid stimulus
Alias
GLIP1( alias )
Gene model
AT5G40990.1 | From: 16436148 | To: 16437628
Sequence
AT5G40990.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
carboxylesterase activity PMID:
lipase activity PMID: 16126835
cellular_component
extracellular space PMID: 16126835
biological_process
response to salicylic acid stimulus PMID: 16126835
defense response to fungus PMID: 16126835
response to fungus PMID: 16126835
induced systemic resistance, ethylene mediated signaling pathway PMID: 16126835
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

  salicylic acid     ethylene  

[   salicylic acid   ]

Genotype PMID Type
35S:GLIP1 19077166 transgenic

[   ethylene   ]

Genotype PMID Type
35S:GLIP1 19077166 transgenic

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT5G40990.1 
length: 1125 
miRNA : ath-miR832-5p
length: 21 
 
mfe: -27.9 kcal/mol 
p-value: 0.012720 
 
position  248 
target 5' G                 U  C 
           UUUGAUUCCUGAUUUCA CG  
           AAGCUAAGGGCUAGGGU GU  
miRNA  3' A                 C    
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_27259
AccessionTaxon
estExt_gwp_gw1.C_1380072Physcomitrella patens subsp. patens
NP_175797Arabidopsis thaliana
NP_175801Arabidopsis thaliana
NP_188039Arabidopsis thaliana
NP_198915 ( AT5G40990 )Arabidopsis thaliana
27585.m000149Ricinus communis
27585.m000150Ricinus communis
27585.m000151Ricinus communis
27585.m000152Ricinus communis
28885.m000108Ricinus communis
29739.m003689Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF006578.000000000000008E-2138354IPR001087Lipase, GDSL
PROSITEPS010980.03849IPR008265Lipase, GDSL, active site