You are querying gene by "AT5G40280".

Locus: AT5G40280 Alias: ATFTB

Hormone Evidence Function category Gene Description PMID
abscisic acidMutant Hormone signal transduction encodes a Farnesyl transferase 8703061 10948248
GeneOntology - response to abscisic acid stimulus 8703061

Basic gene information ( show / hide contents )

Locus AT5G40280 | Chromosome: 5 | Strand: +
Description encodes a Farnesyl transferase
Alias
ATFTB( alias )
ERA1( alias )
WIG( alias )
Gene model
AT5G40280.1 | From: 16118619 | To: 16122189
Sequence
AT5G40280.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
farnesyltranstransferase activity PMID: 8703061
protein farnesyltransferase activity PMID: 10840062
cellular_component
protein farnesyltransferase complex PMID: 10840062
biological_process
protein prenylation PMID: 10948248
response to water deprivation PMID: 16045476
regulation of meristem organization PMID: 9636070
negative regulation of abscisic acid mediated signaling PMID: 16045476
response to abscisic acid stimulus PMID: 8703061
KEGG pathway This gene participates in 1 pathways:
Pathway Enzyme
Other enzymes
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   abscisic acid   ]

Genotype PMID Type
era1-1 12119381 mutant
era1-2abi2-1 12119381 mutant
abh1era1-2 11525733 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT5G40280.1 
length: 1627 
miRNA : ath-miR414
length: 21 
 
mfe: -30.1 kcal/mol 
p-value: 0.000730 
 
position  1056 
target 5' A   A          U     U 
           GAC GUGAUGAUGA GAUGA  
           CUG UACUACUACU CUACU  
miRNA  3' A   C          U       
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT5G40280AT2G36270negativeotherN/Amutance10760627

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_11497
AccessionTaxon
NP_198844 ( AT5G40280 )Arabidopsis thaliana
193447Chlamydomonas reinhardtii
NP_001044183Oryza sativa Japonica Group
0200010595Ostreococcus tauri
e_gw1.126.137.1Physcomitrella patens subsp. patens
29822.m003338Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF482395.7E-11522479IPR008930Terpenoid cylases/protein prenyltransferase alpha-alpha toroid
PfamPF004328.099999999999995E-6133172IPR001330Prenyltransferase/squalene oxidase
PfamPF004320.07600000000000001180223IPR001330Prenyltransferase/squalene oxidase
PfamPF004322.8999999999999993E-10231271IPR001330Prenyltransferase/squalene oxidase
PfamPF004322.6E-6394432IPR001330Prenyltransferase/squalene oxidase