You are querying gene by "AT5G37500".

Locus: AT5G37500 Alias: GORK

Hormone Evidence Function category Gene Description PMID
abscisic acidGeneOntology - response to abscisic acid stimulus 14596925
jasmonic acidGeneOntology - response to jasmonic acid stimulus 15064385

Basic gene information ( show / hide contents )

Locus AT5G37500 | Chromosome: 5 | Strand: -
Description response to abscisic acid stimulus
Alias
GORK( alias )
Gene model
AT5G37500.1 | From: 14906922 | To: 14912134
Sequence
AT5G37500.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
outward rectifier potassium channel activity PMID: 12671068
cyclic nucleotide binding PMID:
inward rectifier potassium channel activity PMID:
cellular_component
membrane PMID:
biological_process
response to water deprivation PMID: 14596925
response to cold PMID: 14596925
response to jasmonic acid stimulus PMID: 15064385
response to abscisic acid stimulus PMID: 14596925
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT5G37500.1 
length: 2860 
miRNA : ath-miR159a
length: 21 
 
mfe: -27.5 kcal/mol 
p-value: 0.032634 
 
position  2188 
target 5' A     C              A 
           GGAGC UCCUUUAAUUUAGA  
           UCUCG GGGAAGUUAGGUUU  
miRNA  3' A     A                
 
 
target: AT5G37500.1 
length: 2860 
miRNA : ath-miR159b
length: 21 
 
mfe: -27.4 kcal/mol 
p-value: 0.032747 
 
position  2187 
target 5' A      C              A 
           AGGAGC UCCUUUAAUUUAGA  
           UUCUCG GGGAAGUUAGGUUU  
miRNA  3'        A                
 
 
target: AT5G37500.1 
length: 2860 
miRNA : ath-miR159c
length: 21 
 
mfe: -30.1 kcal/mol 
p-value: 0.012451 
 
position  2187 
target 5' A      C              A 
           AGGAGC UCCUUUAAUUUAGA  
           UCCUCG GGGAAGUUAGGUUU  
miRNA  3'        A                
 
 
target: AT5G37500.1 
length: 2860 
miRNA : ath-miR828
length: 22 
 
mfe: -22.8 kcal/mol 
p-value: 0.022724 
 
position  409 
target 5' A    A    A      C     C 
           GGAA ACUC GUUUAG CGAGA  
           CCUU UGAG UAAAUU GUUCU  
miRNA  3' A    A           C       
 
 
target: AT5G37500.1 
length: 2860 
miRNA : ath-miR833-5p
length: 22 
 
mfe: -26.0 kcal/mol 
p-value: 0.024987 
 
position  1370 
target 5' G        C          U  C 
           UUAGAUUG AGUACGACAG CA  
           GAUCUGGC UCAUGUUGUU GU  
miRNA  3' U                   U    
 
 
target: AT5G37500.1 
length: 2860 
miRNA : ath-miR857
length: 21 
 
mfe: -22.8 kcal/mol 
p-value: 0.076776 
 
position  72 
target 5' A     G         C      A 
           AUAUA CUUUAACAU ACGAGA  
           UAUGU GAAGUUGUA UGUUUU  
miRNA  3'       G                  
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_12410
AccessionTaxon
NP_186934Arabidopsis thaliana
NP_198566 ( AT5G37500 )Arabidopsis thaliana
168044Chlamydomonas reinhardtii
1100010090Ostreococcus tauri
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PRINTSPR014632.7000018358079414E-97885IPR003938Potassium channel, voltage-dependent, EAG/ELK/ERG
PfamPF005205.000000000000002E-13100306IPR005821Ion transport
PRINTSPR014632.7000018358079414E-9101111IPR003938Potassium channel, voltage-dependent, EAG/ELK/ERG
PRINTSPR014632.7000018358079414E-9210220IPR003938Potassium channel, voltage-dependent, EAG/ELK/ERG
PRINTSPR014632.7000018358079414E-9258275IPR003938Potassium channel, voltage-dependent, EAG/ELK/ERG
PRINTSPR014632.7000018358079414E-9302311IPR003938Potassium channel, voltage-dependent, EAG/ELK/ERG
SuperFamilySSF512061.7E-41313505IPR018490Cyclic nucleotide-binding-like
Gene3DG3DSA:2.60.120.102.800005042611245E-27380519IPR014710RmlC-like jelly roll fold
SuperFamilySSF484031.8E-49385716IPR020683Ankyrin repeat-containing domain
SMARTSM001001.0E-18386504IPR000595Cyclic nucleotide-binding
PROSITEPS500420.0386489IPR000595Cyclic nucleotide-binding
PfamPF000271.3999999999999998E-13405493IPR000595Cyclic nucleotide-binding
Gene3DG3DSA:1.25.40.201.3000049540732415E-46538713IPR020683Ankyrin repeat-containing domain
PROSITEPS502970.0538713IPR020683Ankyrin repeat-containing domain
PfamPF000232.6000000000000002E-5563595IPR002110Ankyrin repeat
SMARTSM002483.000000679928713E-6563592IPR002110Ankyrin repeat
PROSITEPS500880.0563595IPR002110Ankyrin repeat
SMARTSM002480.01596625IPR002110Ankyrin repeat
PROSITEPS500880.0596628IPR002110Ankyrin repeat
SMARTSM00248329.99998331749146627656IPR002110Ankyrin repeat
PfamPF000230.004900000000000004660691IPR002110Ankyrin repeat
SMARTSM002480.016000002110419055660690IPR002110Ankyrin repeat
PROSITEPS500880.0660692IPR002110Ankyrin repeat
SMARTSM002481700.000156104738693722IPR002110Ankyrin repeat
PfamPF118341.1E-8739812IPR021789Protein of unknown function DUF3354