You are querying gene by "AT5G36970".

Locus: AT5G36970 Alias: NHL25

Hormone Evidence Function category Gene Description PMID
salicylic acidGeneOntology - salicylic acid mediated signaling pathway 12059109

Basic gene information ( show / hide contents )

Locus AT5G36970 | Chromosome: 5 | Strand: -
Description salicylic acid mediated signaling pathway
Alias
NHL25( alias )
Gene model
AT5G36970.1 | From: 14621597 | To: 14622424
Sequence
AT5G36970.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
molecular_function_unknown PMID:
cellular_component
cellular_component_unknown PMID:
biological_process
salicylic acid mediated signaling pathway PMID: 12059109
defense response, incompatible interaction PMID: 12059109
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT5G36970.1 
length: 747 
miRNA : ath-miR854a
length: 21 
 
mfe: -34.6 kcal/mol 
p-value: 0.000611 
 
position  204 
target 5' C               G     G 
           CUCUUUCUCCUUAUU UCAUC  
           GAGGAGGAGGGAUAG AGUAG  
miRNA  3'                 G       
 
 
target: AT5G36970.1 
length: 747 
miRNA : ath-miR854b
length: 21 
 
mfe: -34.6 kcal/mol 
p-value: 0.000293 
 
position  204 
target 5' C               G     G 
           CUCUUUCUCCUUAUU UCAUC  
           GAGGAGGAGGGAUAG AGUAG  
miRNA  3'                 G       
 
 
target: AT5G36970.1 
length: 747 
miRNA : ath-miR854c
length: 21 
 
mfe: -34.6 kcal/mol 
p-value: 0.000460 
 
position  204 
target 5' C               G     G 
           CUCUUUCUCCUUAUU UCAUC  
           GAGGAGGAGGGAUAG AGUAG  
miRNA  3'                 G       
 
 
target: AT5G36970.1 
length: 747 
miRNA : ath-miR854d
length: 21 
 
mfe: -34.6 kcal/mol 
p-value: 0.000318 
 
position  204 
target 5' C               G     G 
           CUCUUUCUCCUUAUU UCAUC  
           GAGGAGGAGGGAUAG AGUAG  
miRNA  3'                 G       
 
 
target: AT5G36970.1 
length: 747 
miRNA : ath-miR854e
length: 21 
 
mfe: -34.6 kcal/mol 
p-value: 0.000495 
 
position  204 
target 5' C               G     G 
           CUCUUUCUCCUUAUU UCAUC  
           GAGGAGGAGGGAUAG AGUAG  
miRNA  3'                 G       
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_19167
AccessionTaxon
NP_181089Arabidopsis thaliana
NP_196250Arabidopsis thaliana
NP_566395Arabidopsis thaliana
NP_001044894Oryza sativa Japonica Group
NP_001054317Oryza sativa Japonica Group
e_gw1.137.46.1Physcomitrella patens subsp. patens
e_gw1.378.29.1Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_4270011Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_510029Physcomitrella patens subsp. patens
fgenesh2_pg.scaffold_72000040Physcomitrella patens subsp. patens
gw1.128.59.1Physcomitrella patens subsp. patens
gw1.895.8.1Physcomitrella patens subsp. patens
29439.m000217Ricinus communis
NP_198513 ( AT5G36970 )Arabidopsis thaliana
NP_564862Arabidopsis thaliana
NP_001054263Oryza sativa Japonica Group
fgenesh1_pg.scaffold_25000136Physcomitrella patens subsp. patens
28660.m000190Ricinus communis
NP_564029Arabidopsis thaliana
28694.m000668Ricinus communis
NP_001043387Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF031683.6e-14119222IPR004864Late embryogenesis abundant protein, group 2