You are querying gene by "AT5G27380".

Locus: AT5G27380 Alias: GSH2

Hormone Evidence Function category Gene Description PMID
jasmonic acidGeneOntology - response to jasmonic acid stimulus 16262714

Basic gene information ( show / hide contents )

Locus AT5G27380 | Chromosome: 5 | Strand: -
Description response to jasmonic acid stimulus
Alias
GSH2( alias )
GSHB( alias )
Gene model
AT5G27380.1 | From: 9667974 | To: 9670965
Sequence
AT5G27380.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
glutathione synthase activity PMID: 15302873
cellular_component
cytosol PMID: 8612643
chloroplast PMID: 15610346
biological_process
N-terminal protein myristoylation PMID: 12912986
response to jasmonic acid stimulus PMID: 16262714
glutathione biosynthetic process PMID: 15302873
KEGG pathway This gene participates in 2 pathways:
Pathway Enzyme
Glutamate metabolism glutathione synthase
Glutathione metabolism glutathione synthase
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT5G27380.1 
length: 1910 
miRNA : ath-miR400
length: 21 
 
mfe: -22.0 kcal/mol 
p-value: 0.019107 
 
position  294 
target 5' C       C           U 
           UGGUUUA GAUGCUCUCGU  
           ACUGAAU UUAUGAGAGUA  
miRNA  3' C       A           U 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_11704
AccessionTaxon
NP_568495 ( AT5G27380 )Arabidopsis thaliana
189020Chlamydomonas reinhardtii
NP_001068356Oryza sativa Japonica Group
e_gw1.06.00.176.1Ostreococcus tauri
e_gw1.28.94.1Physcomitrella patens subsp. patens
30128.m008725Ricinus communis
NP_001066523Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PIRPIRSF0015580.057539IPR005615Glutathione synthase, eukaryotic
PANTHERPTHR111300.059539IPR005615Glutathione synthase, eukaryotic
PfamPF039170.070538IPR005615Glutathione synthase, eukaryotic
TIGRFAMTIGR019860.079538IPR005615Glutathione synthase, eukaryotic
Gene3DG3DSA:1.10.1080.102.10000267834025E-18136214IPR014042Glutathione synthase, alpha-helical, eukaryotic
Gene3DG3DSA:3.40.50.17606.899984481992671E-47249372IPR004887Glutathione synthase, substrate-binding, eukaryotic
SuperFamilySSF524405.7E-42269372IPR016185PreATP-grasp-like fold
PfamPF031993.8999999999999713E-36270370IPR004887Glutathione synthase, substrate-binding, eukaryotic
Gene3DG3DSA:3.30.470.208.300014037915945E-26459539IPR013816ATP-grasp fold, subdomain 2