You are querying gene by "AT5G26140".

Locus: AT5G26140 Alias: AtLOG9

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT5G26140 | Chromosome: 5 | Strand: +
Description lysine decarboxylase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lysine biosynthetic process via diaminopimelate; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: protein homodimerization (TAIR:AT5G11950.2); Has 1823 Blast hits to 1823 proteins in 566 species: Archae - 6; Bacteria - 1027; Metazoa - 8; Fungi - 77; Plants - 168; Viruses - 0; Other Eukaryotes - 537 (source: NCBI BLink).
Alias
AtLOG9( alias )
Gene model
AT5G26140.1 | From: 9130799 | To: 9131639
Sequence
AT5G26140.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
molecular_function_unknown PMID:
cellular_component
cellular_component_unknown PMID:
biological_process
lysine biosynthetic process via diaminopimelate PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT5G26140.1 
length: 432 
miRNA : ath-miR783
length: 21 
 
mfe: -25.2 kcal/mol 
p-value: 0.004602 
 
position  54 
target 5' A      C       C A    A 
           GACAUG ACGAGCG A AGCU  
           UUGUAC UGCUCGU U UCGA  
miRNA  3' C      U              A 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

No related Ortholog Groups information for this gene.

DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF036414.199999999999995E-274110IPR005269Conserved hypothetical protein CHP00730