You are querying gene by "AT5G25370".

Locus: AT5G25370 Alias: PLDALPHA3

Hormone Evidence Function category Gene Description PMID
abscisic acidGeneOntology - response to abscisic acid stimulus 18364466

Basic gene information ( show / hide contents )

Locus AT5G25370 | Chromosome: 5 | Strand: -
Description response to abscisic acid stimulus
PLDALPHA3( alias )
Gene model
AT5G25370.1 | From: 8804243 | To: 8807550
AT5G25370.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
phospholipase D activity PMID: 11891260
membrane PMID:
response to water deprivation PMID: 18364466
membrane lipid catabolic process PMID: 18364466
response to salt stress PMID: 18364466
response to abscisic acid stimulus PMID: 18364466
KEGG pathway This gene participates in 3 pathways:
Pathway Enzyme
Glycerophospholipid metabolism phospholipase D
Ether lipid metabolism phospholipase D
GnRH signaling pathway phospholipase D
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT5G25370.1 
length: 2463 
miRNA : ath-miR414
length: 21 
mfe: -24.8 kcal/mol 
p-value: 0.014066 
position  1424 
target 5' C   A          C  U   A 
miRNA  3' A              U  U     
target: AT5G25370.1 
length: 2463 
miRNA : ath-miR836
length: 24 
mfe: -31.2 kcal/mol 
p-value: 0.009822 
position  85 
target 5' U      G                G 
miRNA  3' G      A           G      

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_14362
NP_175666Arabidopsis thaliana
NP_188194Arabidopsis thaliana
NP_192920Arabidopsis thaliana
NP_192921Arabidopsis thaliana
NP_192922Arabidopsis thaliana
NP_197919 ( AT5G25370 )Arabidopsis thaliana
NP_565963Arabidopsis thaliana
NP_567160Arabidopsis thaliana
NP_567989Arabidopsis thaliana
NP_849501Arabidopsis thaliana
NP_849539Arabidopsis thaliana
NP_001042153Oryza sativa Japonica Group
NP_001048777Oryza sativa Japonica Group
NP_001051849Oryza sativa Japonica Group
NP_001054773Oryza sativa Japonica Group
NP_001058015Oryza sativa Japonica Group
NP_001058016Oryza sativa Japonica Group
NP_001058017Oryza sativa Japonica Group
NP_001059324Oryza sativa Japonica Group
NP_001063203Oryza sativa Japonica Group
NP_001063826Oryza sativa Japonica Group
NP_001065108Oryza sativa Japonica Group
e_gw1.19.181.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_80143Physcomitrella patens subsp. patens
estExt_Genewise1.C_940006Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_580068Physcomitrella patens subsp. patens
estExt_fgenesh1_pm.C_100017Physcomitrella patens subsp. patens
estExt_fgenesh1_pm.C_360039Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_20288Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_3240023Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_165000063Physcomitrella patens subsp. patens
28320.m001141Ricinus communis
28725.m000311Ricinus communis
29784.m000369Ricinus communis
29841.m002847Ricinus communis
29848.m004631Ricinus communis
30170.m014290Ricinus communis
30174.m008942Ricinus communis
30190.m011102Ricinus communis
NP_175914Arabidopsis thaliana
28694.m000682Ricinus communis
NP_849502Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PIRPIRSF0364700.01820IPR011402Phospholipase D, plant
SuperFamilySSF495625.7E-134160IPR008973C2 calcium/lipid-binding domain, CaLB
SMARTSM002394.500000347393468E-610132IPR000008C2 calcium-dependent membrane targeting
PANTHERPTHR188960.045808IPR015679Phospholipase D
PfamPF006146.300000000000005E-8334371IPR001736Phospholipase D/Transphosphatidylase
SMARTSM001550.015000001875678117334371IPR001736Phospholipase D/Transphosphatidylase
PROSITEPS500350.0334371IPR001736Phospholipase D/Transphosphatidylase
SMARTSM001551.4000004576398235E-8662689IPR001736Phospholipase D/Transphosphatidylase
PROSITEPS500350.0662689IPR001736Phospholipase D/Transphosphatidylase
PfamPF006145.200000000000003E-5663689IPR001736Phospholipase D/Transphosphatidylase