You are querying gene by "AT5G25370".

Locus: AT5G25370 Alias: PLDALPHA3

Hormone Evidence Function category Gene Description PMID
abscisic acidGeneOntology - response to abscisic acid stimulus 18364466

Basic gene information ( show / hide contents )

Locus AT5G25370 | Chromosome: 5 | Strand: -
Description response to abscisic acid stimulus
Alias
PLDALPHA3( alias )
Gene model
AT5G25370.1 | From: 8804243 | To: 8807550
Sequence
AT5G25370.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
phospholipase D activity PMID: 11891260
cellular_component
membrane PMID:
biological_process
response to water deprivation PMID: 18364466
membrane lipid catabolic process PMID: 18364466
response to salt stress PMID: 18364466
response to abscisic acid stimulus PMID: 18364466
KEGG pathway This gene participates in 3 pathways:
Pathway Enzyme
Glycerophospholipid metabolism phospholipase D
Ether lipid metabolism phospholipase D
GnRH signaling pathway phospholipase D
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT5G25370.1 
length: 2463 
miRNA : ath-miR414
length: 21 
 
mfe: -24.8 kcal/mol 
p-value: 0.014066 
 
position  1424 
target 5' C   A          C  U   A 
           GAU GAUGAUGGUG AG UGA  
           CUG CUACUACUAC UC ACU  
miRNA  3' A              U  U     
 
 
target: AT5G25370.1 
length: 2463 
miRNA : ath-miR836
length: 24 
 
mfe: -31.2 kcal/mol 
p-value: 0.009822 
 
position  85 
target 5' U      G                G 
           UAUGCG CAAGGGGAACA AGGA  
           GUGCGU GUUUCCUUUGU UCCU  
miRNA  3' G      A           G      
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_14362
AccessionTaxon
NP_175666Arabidopsis thaliana
NP_188194Arabidopsis thaliana
NP_192920Arabidopsis thaliana
NP_192921Arabidopsis thaliana
NP_192922Arabidopsis thaliana
NP_197919 ( AT5G25370 )Arabidopsis thaliana
NP_565963Arabidopsis thaliana
NP_567160Arabidopsis thaliana
NP_567989Arabidopsis thaliana
NP_849501Arabidopsis thaliana
NP_849539Arabidopsis thaliana
NP_001042153Oryza sativa Japonica Group
NP_001048777Oryza sativa Japonica Group
NP_001051849Oryza sativa Japonica Group
NP_001054773Oryza sativa Japonica Group
NP_001058015Oryza sativa Japonica Group
NP_001058016Oryza sativa Japonica Group
NP_001058017Oryza sativa Japonica Group
NP_001059324Oryza sativa Japonica Group
NP_001063203Oryza sativa Japonica Group
NP_001063826Oryza sativa Japonica Group
NP_001065108Oryza sativa Japonica Group
e_gw1.19.181.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_80143Physcomitrella patens subsp. patens
estExt_Genewise1.C_940006Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_580068Physcomitrella patens subsp. patens
estExt_fgenesh1_pm.C_100017Physcomitrella patens subsp. patens
estExt_fgenesh1_pm.C_360039Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_20288Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_3240023Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_165000063Physcomitrella patens subsp. patens
28320.m001141Ricinus communis
28725.m000311Ricinus communis
29784.m000369Ricinus communis
29841.m002847Ricinus communis
29848.m004631Ricinus communis
30170.m014290Ricinus communis
30174.m008942Ricinus communis
30190.m011102Ricinus communis
NP_175914Arabidopsis thaliana
28694.m000682Ricinus communis
NP_849502Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PIRPIRSF0364700.01820IPR011402Phospholipase D, plant
SuperFamilySSF495625.7E-134160IPR008973C2 calcium/lipid-binding domain, CaLB
SMARTSM002394.500000347393468E-610132IPR000008C2 calcium-dependent membrane targeting
PANTHERPTHR188960.045808IPR015679Phospholipase D
PfamPF006146.300000000000005E-8334371IPR001736Phospholipase D/Transphosphatidylase
SMARTSM001550.015000001875678117334371IPR001736Phospholipase D/Transphosphatidylase
PROSITEPS500350.0334371IPR001736Phospholipase D/Transphosphatidylase
SMARTSM001551.4000004576398235E-8662689IPR001736Phospholipase D/Transphosphatidylase
PROSITEPS500350.0662689IPR001736Phospholipase D/Transphosphatidylase
PfamPF006145.200000000000003E-5663689IPR001736Phospholipase D/Transphosphatidylase