You are querying gene by "AT5G21010".

Locus: AT5G21010 Alias: ATBPM5

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT5G21010 | Chromosome: 5 | Strand: +
Description BTB-POZ and MATH domain 5 (ATBPM5); FUNCTIONS IN: protein binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083), BTB/POZ fold (InterPro:IPR011333), BTB/POZ (InterPro:IPR013069), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ATBPM6 (BTB-POZ and MATH domain 6); protein binding (TAIR:AT3G43700.1); Has 5740 Blast hits to 5554 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 4466; Fungi - 135; Plants - 899; Viruses - 48; Other Eukaryotes - 192 (source: NCBI BLink).
Alias
ATBPM5( alias )
Gene model
AT5G21010.1 | From: 7136011 | To: 7138683
Sequence
AT5G21010.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
protein binding PMID:
biological_process
biological_process_unknown PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT5G21010.1 
length: 1593 
miRNA : ath-miR852
length: 21 
 
mfe: -24.1 kcal/mol 
p-value: 0.026603 
 
position  1042 
target 5' A       A A        C   A 
           GGAACUA A GGCGUUUG CUU  
           UCUUGAU U CCGCGAAU GAA  
miRNA  3' G                  A     
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_55995
AccessionTaxon
NP_189956Arabidopsis thaliana
NP_197600 ( AT5G21010 )Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:2.60.210.102.5000008644593967E-625169IPR013322TRAF-type
SuperFamilySSF495996.0E-3725164IPR008974TRAF-like
PROSITEPS501440.028162IPR002083MATH
SMARTSM000614.3000017064586686E-1033145IPR002083MATH
PfamPF009171.999999999999999E-549162IPR002083MATH
SuperFamilySSF546951.1E-27173311IPR011333BTB/POZ fold
Gene3DG3DSA:3.30.710.101.0E-18174308IPR011333BTB/POZ fold
PfamPF006519.400000000000029E-20191310IPR013069BTB/POZ
SMARTSM002255.100010023582437E-24198312IPR000210BTB/POZ-like
PROSITEPS500970.0198264IPR000210BTB/POZ-like
PANTHERPTHR232301.9000069431526996E-76208366IPR013089Kelch related