You are querying gene by "AT5G19880".

Locus: AT5G19880 Alias: AT5G19880

Hormone Evidence Function category Gene Description PMID
ethyleneGeneOntology - response to ethylene stimulus

Basic gene information ( show / hide contents )

Locus AT5G19880 | Chromosome: 5 | Strand: -
Description response to ethylene stimulus
AT5G19880( alias )
Gene model
AT5G19880.1 | From: 6720386 | To: 6722477
AT5G19880.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
peroxidase activity PMID:
endomembrane system PMID:
N-terminal protein myristoylation PMID: 12912986
response to virus PMID:
response to ethylene stimulus PMID:
KEGG pathway This gene participates in 3 pathways:
Pathway Enzyme
Methane metabolism peroxidase
Phenylalanine metabolism peroxidase
Stilbene, coumarine and lignin biosynthesis peroxidase
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT5G19880.1 
length: 1248 
miRNA : ath-miR391
length: 21 
mfe: -28.4 kcal/mol 
p-value: 0.013572 
position  415 
target 5' C  A          G   U  U 
miRNA  3' A  G          G      U 
target: AT5G19880.1 
length: 1248 
miRNA : ath-miR860
length: 21 
mfe: -24.5 kcal/mol 
p-value: 0.006283 
position  276 
target 5' G    G          A       A 
miRNA  3'                           
target: AT5G19880.1 
length: 1248 
miRNA : ath-miR862-3p
length: 21 
mfe: -26.3 kcal/mol 
p-value: 0.007951 
position  648 
target 5' C       A            G 
miRNA  3'         A            A 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

No related Ortholog Groups information for this gene.

DatabaseEntry IDE-valueStartEndInterPro IDDescription
PROSITEPS5087376.71924329IPR002016Haem peroxidase, plant/fungal/bacterial
SuperFamilySSF481136.5e-10624329IPR010255Haem peroxidase
PRINTSPR004619.7e-653453IPR000823Plant peroxidase
PfamPF001416.5e-6645292IPR002016Haem peroxidase, plant/fungal/bacterial
PRINTSPR004581.3e-325670IPR002016Haem peroxidase, plant/fungal/bacterial
PROSITEPS00436NA5667IPR019794Peroxidase, active site
PRINTSPR004619.7e-655878IPR000823Plant peroxidase
PRINTSPR004619.7e-65100113IPR000823Plant peroxidase
PRINTSPR004619.7e-65119129IPR000823Plant peroxidase
PRINTSPR004581.3e-32120137IPR002016Haem peroxidase, plant/fungal/bacterial
PRINTSPR004581.3e-32138150IPR002016Haem peroxidase, plant/fungal/bacterial
PRINTSPR004619.7e-65138153IPR000823Plant peroxidase
PRINTSPR004619.7e-65185197IPR000823Plant peroxidase
PRINTSPR004581.3e-32186201IPR002016Haem peroxidase, plant/fungal/bacterial
PROSITEPS00435NA186196IPR019793Peroxidases heam-ligand binding site
PRINTSPR004619.7e-65245260IPR000823Plant peroxidase
PRINTSPR004581.3e-32247262IPR002016Haem peroxidase, plant/fungal/bacterial
PRINTSPR004619.7e-65261278IPR000823Plant peroxidase
PRINTSPR004619.7e-65303316IPR000823Plant peroxidase