You are querying gene by "AT5G19180".

Locus: AT5G19180 Alias: ECR1

Hormone Evidence Function category Gene Description PMID
auxinMutant Hormone signal transduction ubiquitin-like activating enzyme, forming heterodimer with AXR1 17449645 11884684

Basic gene information ( show / hide contents )

Locus AT5G19180 | Chromosome: 5 | Strand: +
Description ubiquitin-like activating enzyme, forming heterodimer with AXR1
Alias
ECR1( alias )
Gene model
AT5G19180.1 | From: 6453278 | To: 6456016
Sequence
AT5G19180.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
small protein activating enzyme activity PMID: 9624055
NEDD8 activating enzyme activity PMID: 9624055
protein heterodimerization activity PMID: 9624055
cellular_component
cellular_component_unknown PMID:
biological_process
protein neddylation PMID: 10611386
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   auxin   ]

Genotype PMID Type
ECR1-C 11884684 mutant
axr1-12 ECR1-C1 11884684 mutant
ecr1-1 17449645 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT5G19180.1 
length: 1728 
miRNA : ath-miR837-5p
length: 21 
 
mfe: -21.4 kcal/mol 
p-value: 0.108338 
 
position  872 
target 5' A      U U       G    G 
           UGAGGC A CAGGAGA CUGA  
           ACUUUG U GUUCUUU GACU  
miRNA  3'        C U            A 
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT5G19180AT3G62980PositiveotherN/Amutance17449645
AT5G19180AT5G49980PositiveotherN/Amutance17449645

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_11518
AccessionTaxon
NP_568370 ( AT5G19180 )Arabidopsis thaliana
114649Chlamydomonas reinhardtii
NP_001042708Oryza sativa Japonica Group
e_gw1.03.00.238.1Ostreococcus tauri
estExt_Genewise1.C_2350010Physcomitrella patens subsp. patens
estExt_Genewise1.C_3030062Physcomitrella patens subsp. patens
29844.m003336Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF008992.1999999999999685E-3846189IPR000594UBA/THIF-type NAD/FAD binding fold
Gene3DG3DSA:3.40.50.7201.8E-547159IPR016040NAD(P)-binding domain
SuperFamilySSF695721.6E-9748440IPR009036Molybdenum cofactor biosynthesis, MoeB
PfamPF105852.3000000000000006E-10194240IPR019572Ubiquitin-activating enzyme
PROSITEPS008650.0213221IPR018074Ubiquitin-activating enzyme, E1, active site
PfamPF021344.7000000000000056E-21244308IPR000127Ubiquitin-activating enzyme repeat
PfamPF088252.200000000000004E-25348440IPR014929E2 binding