You are querying gene by "AT5G19000".

Locus: AT5G19000 Alias: ATBPM1

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT5G19000 | Chromosome: 5 | Strand: +
Description BTB-POZ and MATH domain 1 (ATBPM1); FUNCTIONS IN: protein binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: shoot, male gametophyte, flower, root, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083), BTB/POZ fold (InterPro:IPR011333), BTB/POZ (InterPro:IPR013069), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: BPM2 (BTB-POZ AND MATH DOMAIN 2); protein binding (TAIR:AT3G06190.1); Has 4702 Blast hits to 4630 proteins in 118 species: Archae - 0; Bacteria - 0; Metazoa - 3617; Fungi - 41; Plants - 884; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink).
ATBPM1( alias )
Gene model
AT5G19000.1 | From: 6342269 | To: 6344796
AT5G19000.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
protein binding PMID:
biological_process_unknown PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT5G19000.1 
length: 1673 
miRNA : ath-miR396a
length: 21 
mfe: -25.1 kcal/mol 
p-value: 0.026723 
position  693 
target 5' A   A   U      A       A 
miRNA  3' G       U                
target: AT5G19000.1 
length: 1673 
miRNA : ath-miR396b
length: 21 
mfe: -25.3 kcal/mol 
p-value: 0.020482 
position  692 
target 5' C    A   U      A       A 
miRNA  3'          U                
target: AT5G19000.1 
length: 1673 
miRNA : ath-miR776
length: 21 
mfe: -24.1 kcal/mol 
p-value: 0.014978 
position  1025 
target 5' C   A           A    A 
miRNA  3' U   A           A      
target: AT5G19000.1 
length: 1673 
miRNA : ath-miR862-3p
length: 21 
mfe: -25.8 kcal/mol 
p-value: 0.014978 
position  728 
target 5' U                C  G 
miRNA  3' G      A         U  A 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_11872
NP_001031516Arabidopsis thaliana
NP_030522Arabidopsis thaliana
NP_001061285Oryza sativa Japonica Group
NP_001061287Oryza sativa Japonica Group
NP_001061288Oryza sativa Japonica Group
NP_001061289Oryza sativa Japonica Group
gw1. tauri
e_gw1.205.34.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_1480036Physcomitrella patens subsp. patens
estExt_Genewise1.C_3490001Physcomitrella patens subsp. patens
30143.m001182Ricinus communis
29703.m001550Ricinus communis
29726.m003917Ricinus communis
NP_001058677Oryza sativa Japonica Group
NP_197401 ( AT5G19000 )Arabidopsis thaliana
NP_566275Arabidopsis thaliana
NP_001060495Oryza sativa Japonica Group
NP_001064635Oryza sativa Japonica Group
NP_001064636Oryza sativa Japonica Group
NP_001064637Oryza sativa Japonica Group
NP_001064638Oryza sativa Japonica Group
NP_001064643Oryza sativa Japonica Group
NP_001064644Oryza sativa Japonica Group
NP_001064646Oryza sativa Japonica Group
NP_001064648Oryza sativa Japonica Group
NP_001064649Oryza sativa Japonica Group
NP_001064650Oryza sativa Japonica Group
NP_001064654Oryza sativa Japonica Group
NP_001064655Oryza sativa Japonica Group
NP_001064656Oryza sativa Japonica Group
NP_001064657Oryza sativa Japonica Group
30072.m000949Ricinus communis
175298Chlamydomonas reinhardtii
NP_001064642Oryza sativa Japonica Group
NP_001064641Oryza sativa Japonica Group
NP_001064640Oryza sativa Japonica Group
NP_001064671Oryza sativa Japonica Group
NP_001068302Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:3.30.710.102.3000044072653926E-27174308IPR011333BTB/POZ fold
SuperFamilySSF546953.2E-31178311IPR011333BTB/POZ fold
PANTHERPTHR232303.1000130737018863E-88213368IPR013089Kelch related