You are querying gene by "AT5G18930".

Locus: AT5G18930 Alias: BUD2

Hormone Evidence Function category Gene Description PMID
CytokininMutant Hormone biosynthesis BUSHY AND DWARF 2 (BUD2); FUNCTIONS IN: adenosylmethionine decarboxylase activity; INVOLVED IN: spermidine biosynthetic process, spermine biosynthetic process, polyamine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine decarboxylase, core (InterPro:IPR016067), S-adenosylmethionine decarboxylase (InterPro:IPR001985), S-adenosylmethionine decarboxylase, conserved site (InterPro:IPR018166), S-adenosylmethionine decarboxylase subgroup (InterPro:IPR018167); BEST Arabidopsis thaliana protein match is: SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE); adenosylmethionine decarboxylase (TAIR:AT3G02470.4); Has 722 Blast hits to 704 proteins in 203 species: Archae - 0; Bacteria - 52; Metazoa - 167; Fungi - 100; Plants - 340; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). 20386573
auxinMutant Hormone signal transduction BUSHY AND DWARF 2 (BUD2); FUNCTIONS IN: adenosylmethionine decarboxylase activity; INVOLVED IN: spermidine biosynthetic process, spermine biosynthetic process, polyamine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine decarboxylase, core (InterPro:IPR016067), S-adenosylmethionine decarboxylase (InterPro:IPR001985), S-adenosylmethionine decarboxylase, conserved site (InterPro:IPR018166), S-adenosylmethionine decarboxylase subgroup (InterPro:IPR018167); BEST Arabidopsis thaliana protein match is: SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE); adenosylmethionine decarboxylase (TAIR:AT3G02470.4); Has 722 Blast hits to 704 proteins in 203 species: Archae - 0; Bacteria - 52; Metazoa - 167; Fungi - 100; Plants - 340; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). 20386573

Basic gene information ( show / hide contents )

Locus AT5G18930 | Chromosome: 5 | Strand: -
Description BUSHY AND DWARF 2 (BUD2); FUNCTIONS IN: adenosylmethionine decarboxylase activity; INVOLVED IN: spermidine biosynthetic process, spermine biosynthetic process, polyamine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine decarboxylase, core (InterPro:IPR016067), S-adenosylmethionine decarboxylase (InterPro:IPR001985), S-adenosylmethionine decarboxylase, conserved site (InterPro:IPR018166), S-adenosylmethionine decarboxylase subgroup (InterPro:IPR018167); BEST Arabidopsis thaliana protein match is: SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE); adenosylmethionine decarboxylase (TAIR:AT3G02470.4); Has 722 Blast hits to 704 proteins in 203 species: Archae - 0; Bacteria - 52; Metazoa - 167; Fungi - 100; Plants - 340; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).
Alias
BUD2( alias )
SAMDC4( alias )
Gene model
AT5G18930.1 | From: 6311727 | To: 6313325
Sequence
AT5G18930.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
adenosylmethionine decarboxylase activity PMID:
cellular_component
cellular_component_unknown PMID:
biological_process
spermine biosynthetic process PMID:
spermidine biosynthetic process PMID:
polyamine biosynthetic process PMID:
KEGG pathway This gene participates in 1 pathways:
Pathway Enzyme
Arginine and proline metabolism S-adenosylmethionine decarboxylase
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

  cytokinin     auxin  

[   cytokinin   ]

Genotype PMID Type
bud2 20386573 mutant
bud2 axr1-3 20386573 mutant

[   auxin   ]

Genotype PMID Type
bud2 20386573 mutant
bud2 axr1-3 20386573 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

No miRNA interaction information for this gene.

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_11728
AccessionTaxon
NP_001031888Arabidopsis thaliana
NP_001078093Arabidopsis thaliana
NP_001154585Arabidopsis thaliana
NP_186896Arabidopsis thaliana
NP_197099Arabidopsis thaliana
183928Chlamydomonas reinhardtii
NP_001047404Oryza sativa Japonica Group
NP_001053213Oryza sativa Japonica Group
NP_001063217Oryza sativa Japonica Group
fgenesh1_pm.C_Chr_13.0001000010Ostreococcus tauri
e_gw1.29.159.1Physcomitrella patens subsp. patens
e_gw1.29.160.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_3350015Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_1870015Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_2060057Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_2060061Physcomitrella patens subsp. patens
27772.m000038Ricinus communis
NP_197394 ( AT5G18930 )Arabidopsis thaliana
29673.m000902Ricinus communis
30138.m003848Ricinus communis
NP_189184Arabidopsis thaliana
29726.m003938Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PIRPIRSF0013552.1000026783402986E-1041347IPR018167S-adenosylmethionine decarboxylase subgroup
PANTHERPTHR115701.5000096574878444E-892346IPR001985S-adenosylmethionine decarboxylase
PfamPF015364.599999999999957E-934318IPR001985S-adenosylmethionine decarboxylase
Gene3DG3DSA:3.60.90.102.399997981572407E-935343IPR016067S-adenosylmethionine decarboxylase, core
TIGRFAMTIGR005354.1000139969931485E-876346IPR018167S-adenosylmethionine decarboxylase subgroup
SuperFamilySSF562769.9E-1099345IPR016067S-adenosylmethionine decarboxylase, core
PROSITEPS013360.06171IPR018166S-adenosylmethionine decarboxylase, conserved site