You are querying gene by "AT5G18560".

Locus: AT5G18560 Alias: PUCHI

Hormone Evidence Function category Gene Description PMID
auxinMutant Hormone signal transduction AP2 EREBP transcription factor, induced by auxin 17630277

Basic gene information ( show / hide contents )

Locus AT5G18560 | Chromosome: 5 | Strand: -
Description AP2 EREBP transcription factor, induced by auxin
PUCHI( alias )
Gene model
AT5G18560.1 | From: 6164589 | To: 6165993
AT5G18560.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
DNA binding PMID:
transcription factor activity PMID:
nucleus PMID: 17630277
flower development PMID: 17630277
regulation of transcription, DNA-dependent PMID:
lateral root morphogenesis PMID: 17630277
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   auxin   ]

Genotype PMID Type
puchi-1 17630277 mutant

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT5G18560.1 
length: 1405 
miRNA : ath-miR829.2
length: 21 
mfe: -31.1 kcal/mol 
p-value: 0.000038 
position  1284 
target 5' U                    U 
miRNA  3' G                      

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_70518
NP_197357 ( AT5G18560 )Arabidopsis thaliana
NP_001060587Oryza sativa Japonica Group
29726.m004013Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:3.30.730.102.1e-2053114IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
SuperFamilySSF541719.2e-2253114IPR016177DNA-binding, integrase-type
SMARTSM003804.5e-3454117IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PROSITEPS5103220.69254111IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003672.4e-075566IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PfamPF008471.1e-1455103IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003672.4e-077793IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding