You are querying gene by "AT5G17490".

Locus: AT5G17490 Alias: RGL3

Hormone Evidence Function category Gene Description PMID
gibberellinMutant Hormone signal transduction transcription factor (SCRAEROW-like) 11118137
GeneOntology - gibberellic acid mediated signaling 11826301

Basic gene information ( show / hide contents )

Locus AT5G17490 | Chromosome: 5 | Strand: -
Description transcription factor (SCRAEROW-like)
Alias
RGL3( alias )
Gene model
AT5G17490.1 | From: 5764065 | To: 5766079
Sequence
AT5G17490.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
transcription factor activity PMID: 11826301
cellular_component
nucleus PMID: 11826301
biological_process
response to gibberellin stimulus PMID: 11826301
gibberellic acid mediated signaling PMID: 11826301
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   gibberellin   ]

Genotype PMID Type
rgl3-1 11118137 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT5G17490.1 
length: 2015 
miRNA : ath-miR414
length: 21 
 
mfe: -26.6 kcal/mol 
p-value: 0.004942 
 
position  262 
target 5' U                  C  U 
           UG UGGUGGUGGUGGAGA GA  
           AC GCUACUACUACUUCU CU  
miRNA  3'    U               A    
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT5G17490AT1G08780PositiveotherN/Amolecular10787063
AT5G17490AT1G73730negativeotherN/Amolecular17616507
AT5G17490AT2G04240PositiveotherN/Amutance17933900
AT5G17490AT2G14610negativeotherN/Amolecular18450451
AT5G17490AT2G27050negativeotherN/Amolecular17616507
AT5G17490AT2G43010PositiveotherN/Amolecular19249207
AT5G17490AT3G01530negativeotherN/Amolecular19325888
AT5G17490AT3G11540Positiveprotein degradationN/Amutance11118137
AT5G17490AT3G20770negativeotherN/Amolecular17616507
AT5G17490AT3G27810negativeotherN/Amolecular19325888
AT5G17490AT3G57260negativeotherN/Amolecular18450451
AT5G17490AT4G15560negativemetabolismN/AmolecularN/A
AT5G17490AT5G10120negativeotherN/Amolecular17616507
AT5G17490AT5G21120negativeotherN/Amolecular17616507
AT5G17490AT5G40350negativeotherN/Amolecular19325888
AT5G17490AT5G44420PositiveotherN/Amolecular18450451
AT5G17490AT5G65100negativeotherN/Amolecular17616507
AT5G17490DELLA target genesPositiveprotein degradationN/Amutance11118137

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_25711
AccessionTaxon
NP_172945Arabidopsis thaliana
NP_178266Arabidopsis thaliana
NP_001051032Oryza sativa Japonica Group
estExt_Genewise1.C_120199Physcomitrella patens subsp. patens
fgenesh1_pm.scaffold_175000002Physcomitrella patens subsp. patens
28677.m000055Ricinus communis
29692.m000540Ricinus communis
NP_176809Arabidopsis thaliana
NP_186995Arabidopsis thaliana
NP_197251 ( AT5G17490 )Arabidopsis thaliana
NP_001043705Oryza sativa Japonica Group
29807.m000482Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF120411.6999999999999926E-2934103IPR021914Transcriptional factor DELLA, N-terminal
PROSITEPS509850.0131495IPR005202Transcription factor GRAS
PfamPF035144.499999999999962E-127157516IPR005202Transcription factor GRAS