You are querying gene by "AT5G16600".

Locus: AT5G16600 Alias: AtMYB43

Hormone Evidence Function category Gene Description PMID
abscisic acidGeneOntology - response to abscisic acid stimulus 16463103

Basic gene information ( show / hide contents )

Locus AT5G16600 | Chromosome: 5 | Strand: +
Description response to abscisic acid stimulus
Alias
AtMYB43( alias )
MYB43( alias )
Gene model
AT5G16600.1 | From: 5438294 | To: 5440248
Sequence
AT5G16600.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
transcription factor activity PMID: 11118137
biological_process
regulation of transcription, DNA-dependent PMID:
response to abscisic acid stimulus PMID: 16463103
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

No miRNA interaction information for this gene.

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_24382
AccessionTaxon
NP_176797Arabidopsis thaliana
NP_197163 ( AT5G16600 )Arabidopsis thaliana
NP_001057322Oryza sativa Japonica Group
NP_001061847Oryza sativa Japonica Group
NP_001063118Oryza sativa Japonica Group
gw1.433.32.1Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_420000003Physcomitrella patens subsp. patens
NP_567390Arabidopsis thaliana
NP_567664Arabidopsis thaliana
NP_001063765Oryza sativa Japonica Group
30190.m011004Ricinus communis
NP_001048028Oryza sativa Japonica Group
estExt_gwp_gw1.C_780109Physcomitrella patens subsp. patens
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR106413.300019761173846E-953268IPR015495Myb transcription factor
PROSITEPS512940.0961IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
Gene3DG3DSA:1.10.10.601.2999992446818318E-131264IPR012287Homeodomain-related
SMARTSM007171.2000011745813376E-91363IPR001005SANT, DNA-binding
PfamPF002492.4999999999999992E-81461IPR014778Myb, DNA-binding
SuperFamilySSF466897.7E-191484IPR009057Homeodomain-like
PROSITEPS512940.062116IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
SMARTSM007171.0999990912078717E-1466114IPR001005SANT, DNA-binding
Gene3DG3DSA:1.10.10.605.599999894169869E-1668116IPR012287Homeodomain-related
PfamPF002493.100000000000002E-1171111IPR014778Myb, DNA-binding
SuperFamilySSF466896.4E-1486146IPR009057Homeodomain-like