You are querying gene by "AT5G12870".

Locus: AT5G12870 Alias: ATMYB46

Hormone Evidence Function category Gene Description PMID
salicylic acidGeneOntology - response to salicylic acid stimulus 16463103

Basic gene information ( show / hide contents )

Locus AT5G12870 | Chromosome: 5 | Strand: -
Description response to salicylic acid stimulus
Alias
ATMYB46( alias )
MYB46( alias )
Gene model
AT5G12870.1 | From: 4062727 | To: 4064995
Sequence
AT5G12870.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
transcription factor activity PMID: 11118137
cellular_component
nucleus PMID: 16581911
biological_process
response to salicylic acid stimulus PMID: 16463103
regulation of transcription, DNA-dependent PMID:
plant-type secondary cell wall biogenesis PMID: 17890373
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

No miRNA interaction information for this gene.

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_91098
AccessionTaxon
NP_187463Arabidopsis thaliana
NP_196791 ( AT5G12870 )Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PROSITEPS512940.01567IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
PANTHERPTHR106411.5000096574878445E-9816268IPR015495Myb transcription factor
Gene3DG3DSA:1.10.10.608.399998585923837E-141870IPR012287Homeodomain-related
SMARTSM007171.2000011745813376E-101969IPR001005SANT, DNA-binding
PfamPF002491.3000000000000007E-82067IPR014778Myb, DNA-binding
SuperFamilySSF466898.2E-222089IPR009057Homeodomain-like
PROSITEPS512940.068122IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
SMARTSM007171.29999924468179E-1572120IPR001005SANT, DNA-binding
PfamPF002493.600000000000006E-1073116IPR014778Myb, DNA-binding
Gene3DG3DSA:1.10.10.609.900018047983378E-1774122IPR012287Homeodomain-related
SuperFamilySSF466897.0E-1092129IPR009057Homeodomain-like