You are querying gene by "AT5G11320".

Locus: AT5G11320 Alias: YUC4

Hormone Evidence Function category Gene Description PMID
auxinMutant Hormone biosynthesis YUCCA flavin monooxygenases 16818609 17704214 18000043
GeneOntology - auxin biosynthetic process 16818609

Basic gene information ( show / hide contents )

Locus AT5G11320 | Chromosome: 5 | Strand: -
Description YUCCA flavin monooxygenases
YUC4( alias )
Gene model
AT5G11320.2 | From: 3611991 | To: 3613362
AT5G11320.1 | From: 3611248 | To: 3613362
AT5G11320.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT5G11320.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
monooxygenase activity PMID:
phyllome development PMID: 18000043
anatomical structure morphogenesis PMID: 17704214
inflorescence development PMID: 18000043
cotyledon development PMID: 18000043
auxin biosynthetic process PMID: 16818609
positive regulation of flower development PMID: 18000043
leaf development PMID: 17704214
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   auxin   ]

Genotype PMID Type
yuc1 yuc yuc4 yuc6 16818609 mutant

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT5G11320.1 
length: 1418 
miRNA : ath-miR842
length: 21 
mfe: -29.1 kcal/mol 
p-value: 0.006121 
position  348 
target 5' C       C      U      A 
miRNA  3' C       C               
target: AT5G11320.2 
length: 1141 
miRNA : ath-miR842
length: 21 
mfe: -29.1 kcal/mol 
p-value: 0.004753 
position  348 
target 5' C       C      U      A 
miRNA  3' C       C               

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_12899
NP_171955Arabidopsis thaliana
NP_180881Arabidopsis thaliana
NP_194980Arabidopsis thaliana
e_gw1.139.33.1Physcomitrella patens subsp. patens
e_gw1.204.26.1Physcomitrella patens subsp. patens
e_gw1.37.68.1Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_11000006Physcomitrella patens subsp. patens
fgenesh1_pm.scaffold_22000038Physcomitrella patens subsp. patens
29904.m003041Ricinus communis
30204.m001831Ricinus communis
NP_196693 ( AT5G11320 )Arabidopsis thaliana
NP_850808Arabidopsis thaliana
NP_001043702Oryza sativa Japonica Group
NP_175321Arabidopsis thaliana
NP_171914Arabidopsis thaliana
NP_194601Arabidopsis thaliana
NP_199202Arabidopsis thaliana
NP_001052088Oryza sativa Japonica Group
30093.m000370Ricinus communis
29848.m004706Ricinus communis
NP_001049048Oryza sativa Japonica Group
NP_001042455Oryza sativa Japonica Group
NP_001059508Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PRINTSPR003681.9000006847787025E-81638IPR013027FAD-dependent pyridine nucleotide-disulphide oxidoreductase
PRINTSPR004696.899999633797004E-111638IPR000103Pyridine nucleotide-disulphide oxidoreductase, class-II
PRINTSPR003682.6999988713205973E-81638IPR013027FAD-dependent pyridine nucleotide-disulphide oxidoreductase
PRINTSPR004699.800002721302184E-111638IPR000103Pyridine nucleotide-disulphide oxidoreductase, class-II
PfamPF007434.5000000000000034E-2419331IPR020946Flavin-containing monooxygenase-like
PfamPF007438.200000000000062E-2419329IPR020946Flavin-containing monooxygenase-like
PRINTSPR004696.899999633797004E-11135143IPR000103Pyridine nucleotide-disulphide oxidoreductase, class-II
PRINTSPR004699.800002721302184E-11135143IPR000103Pyridine nucleotide-disulphide oxidoreductase, class-II
PRINTSPR003681.9000006847787025E-8137146IPR013027FAD-dependent pyridine nucleotide-disulphide oxidoreductase
PRINTSPR003682.6999988713205973E-8137146IPR013027FAD-dependent pyridine nucleotide-disulphide oxidoreductase
PRINTSPR004696.899999633797004E-11174198IPR000103Pyridine nucleotide-disulphide oxidoreductase, class-II
PRINTSPR004699.800002721302184E-11174198IPR000103Pyridine nucleotide-disulphide oxidoreductase, class-II
PRINTSPR003681.9000006847787025E-8178203IPR013027FAD-dependent pyridine nucleotide-disulphide oxidoreductase
PRINTSPR003682.6999988713205973E-8178203IPR013027FAD-dependent pyridine nucleotide-disulphide oxidoreductase