You are querying gene by "AT5G10450".

Locus: AT5G10450 Alias: 14-3-3lambda

Hormone Evidence Function category Gene Description PMID
brassinosteroidGeneOntology - brassinosteroid mediated signaling 17681130

Basic gene information ( show / hide contents )

Locus AT5G10450 | Chromosome: 5 | Strand: -
Description brassinosteroid mediated signaling
Alias
14-3-3lambda( alias )
AFT1( alias )
GRF6( alias )
Gene model
AT5G10450.1 | From: 3283854 | To: 3286318
AT5G10450.2 | From: 3283868 | To: 3286348
Sequence
AT5G10450.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT5G10450.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
protein phosphorylated amino acid binding PMID: 10631267
protein binding PMID:
cellular_component
nucleus PMID:
cytosol PMID: 15592873
cytoplasm PMID:
plasma membrane PMID:
biological_process
phosphorylation PMID: 15592873
brassinosteroid mediated signaling PMID: 17681130
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT5G10450.1 
length: 1402 
miRNA : ath-miR779.1
length: 21 
 
mfe: -28.6 kcal/mol 
p-value: 0.004853 
 
position  56 
target 5' A              U  G     A 
           AUG GCGGCGACAU AG CAGAG  
           UAC CGUCGUUGUA UC GUCUU  
miRNA  3'     U                     
 
 
target: AT5G10450.1 
length: 1402 
miRNA : ath-miR843
length: 21 
 
mfe: -25.0 kcal/mol 
p-value: 0.028971 
 
position  574 
target 5' A      A             C 
           UCCGAU AGGCUUGGUCUGG  
           AGGUUA UUCGAGCUGGAUU  
miRNA  3'        C             U 
 
 
target: AT5G10450.1 
length: 1402 
miRNA : ath-miR847
length: 21 
 
mfe: -25.6 kcal/mol 
p-value: 0.025014 
 
position  805 
target 5' G   U   U            G 
           AUC AGA GAAGGGGGG GA  
           UAG UCU CUUCUCCUC CU  
miRNA  3' G   U   U         A    
 
 
target: AT5G10450.1 
length: 1402 
miRNA : ath-miR857
length: 21 
 
mfe: -23.7 kcal/mol 
p-value: 0.016665 
 
position  764 
target 5' U  G    C            G 
           UG ACCU CGAUAUGCAGGA  
           AU UGGA GUUGUAUGUUUU  
miRNA  3' U  G    A              
 
 
target: AT5G10450.2 
length: 1412 
miRNA : ath-miR779.1
length: 21 
 
mfe: -28.6 kcal/mol 
p-value: 0.004898 
 
position  86 
target 5' A              U  G     A 
           AUG GCGGCGACAU AG CAGAG  
           UAC CGUCGUUGUA UC GUCUU  
miRNA  3'     U                     
 
 
target: AT5G10450.2 
length: 1412 
miRNA : ath-miR843
length: 21 
 
mfe: -25.0 kcal/mol 
p-value: 0.029233 
 
position  604 
target 5' A      A             C 
           UCCGAU AGGCUUGGUCUGG  
           AGGUUA UUCGAGCUGGAUU  
miRNA  3'        C             U 
 
 
target: AT5G10450.2 
length: 1412 
miRNA : ath-miR847
length: 21 
 
mfe: -25.6 kcal/mol 
p-value: 0.025158 
 
position  829 
target 5' G   U   U            G 
           AUC AGA GAAGGGGGG GA  
           UAG UCU CUUCUCCUC CU  
miRNA  3' G   U   U         A    
 
 
target: AT5G10450.2 
length: 1412 
miRNA : ath-miR857
length: 21 
 
mfe: -23.2 kcal/mol 
p-value: 0.023296 
 
position  794 
target 5' U  G    C           U 
           UG ACCU CGAUAUGCAGA  
           AU UGGA GUUGUAUGUUU  
miRNA  3' U  G    A           U 
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT5G10450AT1G05160negativeotherN/AGO/others17681130
AT5G10450AT2G32440negativeotherN/AGO/others17681130

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_10210
AccessionTaxon
NP_001031982Arabidopsis thaliana
NP_568325Arabidopsis thaliana
NP_568557Arabidopsis thaliana
185967Chlamydomonas reinhardtii
NP_001047234Oryza sativa Japonica Group
NP_001051051Oryza sativa Japonica Group
NP_001053003Oryza sativa Japonica Group
NP_001061856Oryza sativa Japonica Group
gw1.18.00.170.1Ostreococcus tauri
estExt_Genewise1.C_2010026Physcomitrella patens subsp. patens
estExt_Genewise1.C_670097Physcomitrella patens subsp. patens
estExt_fgenesh1_pm.C_3480002Physcomitrella patens subsp. patens
gw1.46.9.1Physcomitrella patens subsp. patens
29908.m006038Ricinus communis
NP_566174Arabidopsis thaliana
28842.m000907Ricinus communis
30174.m009120Ricinus communis
NP_001077649Arabidopsis thaliana
NP_564451Arabidopsis thaliana
NP_001154216Arabidopsis thaliana
NP_564453Arabidopsis thaliana
NP_565176Arabidopsis thaliana
NP_567344Arabidopsis thaliana
NP_001031868Arabidopsis thaliana
NP_568229 ( AT5G10450 )Arabidopsis thaliana
NP_569012Arabidopsis thaliana
NP_851274Arabidopsis thaliana
29908.m006234Ricinus communis
estExt_Genewise1.C_1400036Physcomitrella patens subsp. patens
estExt_fgenesh2_pg.C_1370075Physcomitrella patens subsp. patens
estExt_fgenesh2_pg.C_730052Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_1370068Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_73000051Physcomitrella patens subsp. patens
NP_564167Arabidopsis thaliana
NP_849698Arabidopsis thaliana
NP_973884Arabidopsis thaliana
NP_564249Arabidopsis thaliana
29908.m006068Ricinus communis
NP_001068067Oryza sativa Japonica Group
187228Chlamydomonas reinhardtii
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR188607.9e-1882248IPR00030814-3-3 protein
PANTHERPTHR188602.8e-1882246IPR00030814-3-3 protein
SuperFamilySSF484455.8e-1024240IPR00030814-3-3 protein
SuperFamilySSF484455.8e-1024240IPR00030814-3-3 protein
Gene3DG3DSA:1.20.190.204.6e-1035248IPR00030814-3-3 protein
PIRPIRSF0008684e-1635248IPR00030814-3-3 protein
Gene3DG3DSA:1.20.190.209.1e-1035245IPR00030814-3-3 protein
PIRPIRSF0008687.3e-1635245IPR00030814-3-3 protein
PfamPF002444.4e-1117244IPR00030814-3-3 protein
SMARTSM001011.1e-1807247IPR00030814-3-3 protein
PfamPF002445.4e-1117244IPR00030814-3-3 protein
SMARTSM001011.2e-1797246IPR00030814-3-3 protein
PRINTSPR003051.7e-884271IPR00030814-3-3 protein
PRINTSPR003051.7e-884271IPR00030814-3-3 protein
PROSITEPS00796NA4858IPR00030814-3-3 protein
PROSITEPS00796NA4858IPR00030814-3-3 protein
PRINTSPR003051.7e-8891115IPR00030814-3-3 protein
PRINTSPR003051.7e-8891115IPR00030814-3-3 protein
PRINTSPR003051.7e-88122144IPR00030814-3-3 protein
PRINTSPR003051.7e-88122144IPR00030814-3-3 protein
PRINTSPR003051.7e-88157183IPR00030814-3-3 protein
PRINTSPR003051.7e-88157183IPR00030814-3-3 protein
PRINTSPR003051.7e-88184210IPR00030814-3-3 protein
PRINTSPR003051.7e-88184210IPR00030814-3-3 protein
PRINTSPR003051.7e-88211240IPR00030814-3-3 protein
PRINTSPR003051.7e-88211240IPR00030814-3-3 protein
PROSITEPS00797NA220239IPR00030814-3-3 protein
PROSITEPS00797NA220239IPR00030814-3-3 protein