You are querying gene by "AT5G10280".

Locus: AT5G10280 Alias: ATMYB64

Hormone Evidence Function category Gene Description PMID
salicylic acidGeneOntology - response to salicylic acid stimulus 16463103
jasmonic acidGeneOntology - response to jasmonic acid stimulus 16463103

Basic gene information ( show / hide contents )

Locus AT5G10280 | Chromosome: 5 | Strand: +
Description response to salicylic acid stimulus
Alias
ATMYB64( alias )
ATMYB92( alias )
MYB92( alias )
Gene model
AT5G10280.1 | From: 3232570 | To: 3234211
Sequence
AT5G10280.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
transcription factor activity PMID: 11118137
biological_process
response to salicylic acid stimulus PMID: 16463103
regulation of transcription, DNA-dependent PMID:
response to jasmonic acid stimulus PMID: 16463103
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT5G10280.1 
length: 1466 
miRNA : ath-miR1886.2
length: 21 
 
mfe: -27.3 kcal/mol 
p-value: 0.000481 
 
position  1368 
target 5' A    A            A    U 
           CAGU CAGAGAUUUCAU CUCA  
           GUUA GUUUCUAAAGUA GAGU  
miRNA  3' G                        
 
 
target: AT5G10280.1 
length: 1466 
miRNA : ath-miR828
length: 22 
 
mfe: -24.2 kcal/mol 
p-value: 0.004055 
 
position  528 
target 5' C     C         A       A 
           UGGAA ACUCAUUUG AG AAGA  
           ACCUU UGAGUAAAU UC UUCU  
miRNA  3'       A            G      
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_91486
AccessionTaxon
NP_196590 ( AT5G10280 )Arabidopsis thaliana
NP_201326Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR106411.3999927719513819E-1013274IPR015495Myb transcription factor
PROSITEPS512940.0961IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
Gene3DG3DSA:1.10.10.607.199995576546186E-171264IPR012287Homeodomain-related
SMARTSM007172.0999980669153363E-151363IPR001005SANT, DNA-binding
PfamPF002496.900000000000011E-141461IPR014778Myb, DNA-binding
SuperFamilySSF466892.0E-231483IPR009057Homeodomain-like
PROSITEPS512940.062116IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
SMARTSM007172.499998119564648E-1566114IPR001005SANT, DNA-binding
PfamPF002491.0999999999999999E-1167112IPR014778Myb, DNA-binding
Gene3DG3DSA:1.10.10.601.9999963603453647E-1768116IPR012287Homeodomain-related
SuperFamilySSF466895.4E-1486146IPR009057Homeodomain-like