You are querying gene by "AT5G10030".

Locus: AT5G10030 Alias: OBF4

Hormone Evidence Function category Gene Description PMID
salicylic acidMutant Hormone signal transduction transcription factor 17369431

Basic gene information ( show / hide contents )

Locus AT5G10030 | Chromosome: 5 | Strand: -
Description transcription factor
Alias
OBF4( alias )
TGA4( alias )
Gene model
AT5G10030.1 | From: 3137336 | To: 3140253
Sequence
AT5G10030.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID: 8252072
calmodulin binding PMID: 11782485
transcription factor activity PMID: 10659709
cellular_component
nucleus PMID:
biological_process
response to cold PMID: 14617066
defense response to bacterium PMID: 17369431
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   salicylic acid   ]

Genotype PMID Type
tga1-1 tga4-1 17369431 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT5G10030.1 
length: 1675 
miRNA : ath-miR828
length: 22 
 
mfe: -25.8 kcal/mol 
p-value: 0.001836 
 
position  532 
target 5' A    A G       C      A 
           GGAA A UCGUUUG GCAAGA  
           CCUU U AGUAAAU CGUUCU  
miRNA  3' A    A G       U        
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT5G10030AT2G14610PositivetransciptN/Amutance17369431

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_40651
AccessionTaxon
NP_001032147Arabidopsis thaliana
NP_001032148Arabidopsis thaliana
NP_001032149Arabidopsis thaliana
NP_001078800Arabidopsis thaliana
NP_196565 ( AT5G10030 )Arabidopsis thaliana
NP_201324Arabidopsis thaliana
NP_851273Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SMARTSM003382e-0676139IPR004827Basic-leucine zipper (bZIP) transcription factor
PfamPF001703.1e-0978110IPR011616bZIP transcription factor, bZIP-1
PROSITEPS502178.63478120IPR004827Basic-leucine zipper (bZIP) transcription factor
PROSITEPS00036NA8398IPR004827Basic-leucine zipper (bZIP) transcription factor