You are querying gene by "AT5G07580".

Locus: AT5G07580 Alias: AT5G07580

Hormone Evidence Function category Gene Description PMID
ethyleneGeneOntology - ethylene mediated signaling pathway 9687012

Basic gene information ( show / hide contents )

Locus AT5G07580 | Chromosome: 5 | Strand: +
Description ethylene mediated signaling pathway
AT5G07580( alias )
Gene model
AT5G07580.1 | From: 2399505 | To: 2400602
AT5G07580.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
DNA binding PMID:
transcription factor activity PMID: 11118137
nucleus PMID:
ethylene mediated signaling pathway PMID: 9687012
regulation of transcription, DNA-dependent PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT5G07580.1 
length: 1098 
miRNA : ath-miR156h
length: 20 
mfe: -26.3 kcal/mol 
p-value: 0.002413 
position  953 
target 5' A      G       A    C 
miRNA  3' C      G            U 
target: AT5G07580.1 
length: 1098 
miRNA : ath-miR781
length: 21 
mfe: -21.1 kcal/mol 
p-value: 0.118008 
position  227 
target 5' C    U  G     A       U 
miRNA  3' A    U  G               
target: AT5G07580.1 
length: 1098 
miRNA : ath-miR837-5p
length: 21 
mfe: -22.2 kcal/mol 
p-value: 0.050370 
position  611 
target 5' A    G  U      U    C 
           GAAA GA CAAGAA CUGG  
           CUUU CU GUUCUU GACU  
miRNA  3' A    G  U      U    A 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_70460
NP_196375 ( AT5G07580 )Arabidopsis thaliana
NP_200967Arabidopsis thaliana
30147.m014329Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:3.30.730.105.1e-24175237IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
SuperFamilySSF541716.1e-24175237IPR016177DNA-binding, integrase-type
PfamPF008474.3e-14176226IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
SMARTSM003808.3e-36176240IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PROSITEPS5103224.487176234IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003675.9e-13177188IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003675.9e-13216236IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding