You are querying gene by "AT5G05730".

Locus: AT5G05730 Alias: AMT1

Hormone Evidence Function category Gene Description PMID
ethyleneGeneOntology - response to ethylene stimulus 15980261
auxinMutant Hormone biosynthesis auxin biosynthetic process 15980261
GeneOntology - auxin biosynthetic process 15980261
Jasmonic acidMutant Hormone biosynthesis ASA1 encodes the alpha subunit of anthranilate synthase, which catalyzes the rate-limiting step of tryptophan synthesis. ASA1 is induced by ethylene, and forms a link between ethylene signalling and auxin synthesis in roots. 19435934

Basic gene information ( show / hide contents )

Locus AT5G05730 | Chromosome: 5 | Strand: -
Description auxin biosynthetic process
Alias
AMT1( alias )
ASA1( alias )
TRP5( alias )
WEI2( alias )
Gene model
AT5G05730.1 | From: 1719574 | To: 1722904
Sequence
AT5G05730.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
anthranilate synthase activity PMID: 1392592
cellular_component
anthranilate synthase complex PMID: 1392592
chloroplast PMID: 1392592
biological_process
response to wounding PMID: 1392592
tryptophan biosynthetic process PMID: 1392592
auxin biosynthetic process PMID: 15980261
response to ethylene stimulus PMID: 15980261
response to bacterium PMID:
KEGG pathway This gene participates in 2 pathways:
Pathway Enzyme
Phenylalanine, tyrosine and tryptophan biosynthesis anthranilate synthase component I
Two-component system anthranilate synthase component I
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

  auxin     jasmonic acid  

[   auxin   ]

Genotype PMID Type
wei2 mutant

[   jasmonic acid   ]

Genotype PMID Type
wei2 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT5G05730.1 
length: 2063 
miRNA : ath-miR775
length: 20 
 
mfe: -26.0 kcal/mol 
p-value: 0.028921 
 
position  1312 
target 5' A  A         G A    A 
           GG ACUGCUAGA A UGAA  
           CC UGACGAUCU U GCUU  
miRNA  3' A  G         G A      
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT5G05730AT4G13260negativeotherN/Amutance15980261
AT5G05730AT4G31500negativeotherN/Amutance15980261
AT5G05730AT4G32540negativeotherN/Amutance15980261
AT5G05730AT5G11320negativeotherN/Amutance15980261
AT5G05730AT5G25620negativeotherN/Amutance15980261

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_11808
AccessionTaxon
NP_180530Arabidopsis thaliana
NP_196192 ( AT5G05730 )Arabidopsis thaliana
NP_567028Arabidopsis thaliana
115047Chlamydomonas reinhardtii
NP_001049641Oryza sativa Japonica Group
NP_001051764Oryza sativa Japonica Group
fgenesh1_pm.C_Chr_07.0001000017Ostreococcus tauri
e_gw1.154.7.1Physcomitrella patens subsp. patens
e_gw1.77.21.1Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_1540078Physcomitrella patens subsp. patens
29669.m000830Ricinus communis
29681.m001325Ricinus communis
33474.m000016Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:3.60.120.100.073585IPR005801ADC synthase
SuperFamilySSF563220.077591IPR005801ADC synthase
TIGRFAMTIGR005640.088586IPR005256Anthranilate synthase component I, PabB-like
PfamPF047154.900000000000004E-3189245IPR006805Anthranilate synthase component I, N-terminal
PANTHERPTHR112360.0148593IPR005801ADC synthase
PfamPF004251.399999999999974E-82307577IPR015890Chorismate binding, C-terminal
PRINTSPR000952.6000051765773304E-19407420IPR019999Anthranilate synthase component I
PRINTSPR000952.6000051765773304E-19421434IPR019999Anthranilate synthase component I
PRINTSPR000952.6000051765773304E-19501515IPR019999Anthranilate synthase component I
PRINTSPR000952.6000051765773304E-19516530IPR019999Anthranilate synthase component I