You are querying gene by "AT5G05700".

Locus: AT5G05700 Alias: ATATE1

Hormone Evidence Function category Gene Description PMID
abscisic acidMutant Hormone signal transduction Encodes an arginyl-tRNA:protein transferase (ATE1), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. Another component of the N-end rule pathway is At5g02310/PROTEOLYSIS6 (PRT6). PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination. Mutants of ATE1 also display delayed leaf senescence. 19255443

Basic gene information ( show / hide contents )

Locus AT5G05700 | Chromosome: 5 | Strand: -
Description Encodes an arginyl-tRNA:protein transferase (ATE1), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. Another component of the N-end rule pathway is At5g02310/PROTEOLYSIS6 (PRT6). PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination. Mutants of ATE1 also display delayed leaf senescence.
Alias
ATATE1( alias )
ATE1( alias )
DLS1( alias )
Gene model
AT5G05700.1 | From: 1712671 | To: 1715732
Sequence
AT5G05700.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
arginyltransferase activity PMID:
cellular_component
cellular_component_unknown PMID:
biological_process
protein arginylation PMID:
leaf senescence PMID: 0012366806
KEGG pathway This gene participates in 1 pathways:
Pathway Enzyme
Protein folding and associated processing arginine-tRNA-protein transferase
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   abscisic acid   ]

Genotype PMID Type
ate1-2 ate2-1 19255443 mutant
ate1-2 19255443 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT5G05700.1 
length: 2271 
miRNA : ath-miR414
length: 21 
 
mfe: -34.6 kcal/mol 
p-value: 0.000143 
 
position  1738 
target 5' A               U     G 
           UGAUGAUGAUGAUGA GAUGA  
           ACUGCUACUACUACU CUACU  
miRNA  3'                 U       
 
 
target: AT5G05700.1 
length: 2271 
miRNA : ath-miR837-5p
length: 21 
 
mfe: -21.8 kcal/mol 
p-value: 0.115466 
 
position  520 
target 5' G     A          G    A 
           UGAAG GAAUAAGAAA UUGA  
           ACUUU CUUGUUCUUU GACU  
miRNA  3'       G               A 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_12605
AccessionTaxon
NP_187733Arabidopsis thaliana
NP_196189 ( AT5G05700 )Arabidopsis thaliana
NP_001055690Oryza sativa Japonica Group
gw1.02.00.330.1Ostreococcus tauri
estExt_gwp_gw1.C_3330055Physcomitrella patens subsp. patens
29669.m000840Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PIRPIRSF03720701632IPR017137Arginine-tRNA-protein transferase 1, eukaryotic
PfamPF043767.4e-2627108IPR007471Arginine-tRNA-protein transferase, N-terminal
PfamPF043771.8e-47328471IPR007472Arginine-tRNA-protein transferase, C-terminal